Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11180 and ABID97_RS11185 overlap by 4 nucleotidesABID97_RS11185 and ABID97_RS11190 overlap by 4 nucleotidesABID97_RS11190 and ABID97_RS11195 are separated by 78 nucleotidesABID97_RS11195 and ABID97_RS11200 overlap by 20 nucleotides ABID97_RS11180: ABID97_RS11180 - NAD(P)H-quinone oxidoreductase, at 2,312,326 to 2,313,321 _RS11180 ABID97_RS11185: ABID97_RS11185 - transketolase C-terminal domain-containing protein, at 2,313,318 to 2,314,340 _RS11185 ABID97_RS11190: ABID97_RS11190 - transketolase, at 2,314,337 to 2,315,218 _RS11190 ABID97_RS11195: ABID97_RS11195 - ABC transporter ATP-binding protein, at 2,315,297 to 2,316,013 _RS11195 ABID97_RS11200: ABID97_RS11200 - ABC transporter ATP-binding protein, at 2,315,994 to 2,316,740 _RS11200
Group Condition ABID97_RS11180 ABID97_RS11185 ABID97_RS11190 ABID97_RS11195 ABID97_RS11200
carbon source L-Alanine (C) +0.2 -0.6 -0.8 -0.1 N.D.
carbon source L-Histidine (C) +0.1 -0.5 -0.5 -0.2 N.D.
carbon source butyrate (C) +0.4 -0.1 -0.7 -0.3 N.D.
carbon source L-Alanine (C) -0.3 +0.4 -1.1 +0.2 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.0 -0.8 +0.0 N.D.
carbon source D,L-Malic Acid (C) -0.3 +0.5 -0.7 +0.1 N.D.
carbon source L-Histidine (C) +0.3 -0.4 +0.1 -0.4 N.D.
carbon source Formate (C) +0.3 +0.1 -0.5 -0.3 N.D.
carbon source Glucuronamide (C) +0.3 +0.2 -0.5 +0.1 N.D.
carbon source L-Arabinose (C) +0.4 +0.4 -0.3 -0.3 N.D.
carbon source L-tyrosine (C) +0.9 +0.1 -0.6 -0.1 N.D.
carbon source Glucuronamide (C) +0.1 +0.1 +0.6 -0.4 N.D.
carbon source L-Glutamine (C) +0.2 +0.4 -0.5 +0.2 N.D.
phage V2_100 +0.7 +0.6 -0.4 -0.4 N.D.
carbon source acetate (C) +0.3 -0.4 +0.6 -0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.9 +0.2 -0.5 -0.0 N.D.
carbon source Glycerol (C) +0.1 -0.3 +0.4 +0.3 N.D.
plant outgrowth control Plant outgrowth control -0.2 +0.3 +0.9 -0.4 N.D.
carbon source L-tyrosine (C) +0.3 +0.6 +0.1 -0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.3 +0.8 +0.1 N.D.
phage V1_10 +0.1 +0.6 +0.2 -0.1 N.D.
carbon source D-Fructose (C) +0.2 +0.1 +0.7 -0.1 N.D.
carbon source propionate (C) -0.0 +0.4 +0.6 +0.1 N.D.
carbon source butyrate (C) +0.0 +0.4 +0.4 +0.3 N.D.
carbon source L-Phenylalanine (C) +0.3 +0.5 +0.2 +0.1 N.D.
carbon source Formate (C) +0.1 +0.6 +0.3 +0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.0 +0.9 +0.2 N.D.
carbon source propionate (C) -0.0 +0.1 +0.7 +0.6 N.D.
phage V1_10 +0.3 +0.4 +0.5 +0.5 N.D.
phage V2_10 +0.6 +0.7 +0.3 +0.4 N.D.
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ABID97_RS11180
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ABID97_RS11185
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ABID97_RS11200
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