Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS11005 and ABID97_RS11010 are separated by 93 nucleotidesABID97_RS11010 and ABID97_RS11015 are separated by 75 nucleotidesABID97_RS11015 and ABID97_RS11020 are separated by 88 nucleotidesABID97_RS11020 and ABID97_RS11025 are separated by 49 nucleotides ABID97_RS11005: ABID97_RS11005 - acyl carrier protein, at 2,279,102 to 2,279,344 _RS11005 ABID97_RS11010: ABID97_RS11010 - phosphatase PAP2 family protein, at 2,279,438 to 2,280,154 _RS11010 ABID97_RS11015: ABID97_RS11015 - helix-turn-helix transcriptional regulator, at 2,280,230 to 2,281,072 _RS11015 ABID97_RS11020: ABID97_RS11020 - MFS transporter, at 2,281,161 to 2,282,414 _RS11020 ABID97_RS11025: ABID97_RS11025 - sulfite exporter TauE/SafE family protein, at 2,282,464 to 2,283,216 _RS11025
Group Condition ABID97_RS11005 ABID97_RS11010 ABID97_RS11015 ABID97_RS11020 ABID97_RS11025
carbon source Tween 20 (C) +0.1 -1.1 -0.5 -0.1 +0.2
carbon source Tween 20 (C) -0.2 -1.1 -0.2 -0.0 +0.1
carbon source L-Arabinose (C) -0.5 -0.4 -0.3 +0.0 -0.1
carbon source D-Sorbitol (C) -0.5 -0.2 -0.6 -0.0 +0.3
carbon source a-Ketoglutaric (C) -0.4 +0.1 -0.6 -0.0 +0.1
carbon source D-Glucose (C) -0.5 -0.1 -0.4 +0.1 +0.1
carbon source L-Leucine (C) -0.5 -0.0 -0.3 -0.2 +0.2
carbon source L-tyrosine (C) -0.1 -0.2 -0.9 +0.1 +0.3
carbon source butyrate (C) -0.3 +0.1 -0.4 +0.3 -0.4
carbon source Ethanol (C) +0.2 -0.0 -0.2 -0.0 -0.7
carbon source D-Ribose (C) -0.1 -0.4 -0.4 +0.1 +0.2
carbon source D-Glucuronic Acid (C) -0.4 +0.0 -0.4 -0.0 +0.2
carbon source D-Galactose (C) -0.3 -0.1 -0.3 +0.2 +0.1
carbon source L-Malic (C) -0.0 -0.3 -0.3 -0.2 +0.3
carbon source L-Glutamine (C) -0.1 -0.3 -0.3 -0.1 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.5 -0.4 +0.1 +0.3
carbon source L-Lactate (C) -0.4 -0.2 -0.2 -0.1 +0.4
phage V2_100 -0.3 +0.2 -0.4 +0.1 +0.0
carbon source D-Xylose (C) +0.0 -0.2 -0.5 -0.0 +0.4
plant outgrowth control Plant outgrowth control +0.3 -0.6 +0.0 +0.1 +0.1
plant outgrowth control Plant outgrowth control +0.2 -0.6 +0.1 -0.0 +0.3
carbon source D-Serine (C) -0.2 +0.3 -0.3 +0.2 +0.1
carbon source Adenine (C) +0.6 +0.0 -0.1 +0.1 -0.5
carbon source L-Tryptophan (C) -0.2 +0.4 -0.3 +0.0 +0.3
carbon source D-Ribose (C) -0.1 -0.1 -0.3 +0.1 +0.7
carbon source L-Threonine (C) -0.1 -0.2 +0.4 +0.2 +0.4
carbon source L-Alanine (C) +0.2 +0.3 -0.6 +0.1 +0.7
carbon source 4-Hydroxybenzoic Acid (C) +0.5 +0.0 +0.2 -0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.1 +0.0 +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.4 -0.1 +0.6 -0.0 -0.3
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ABID97_RS11005
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ABID97_RS11010
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ABID97_RS11020
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ABID97_RS11025
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