Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS10665 and ABID97_RS10670 are separated by 28 nucleotidesABID97_RS10670 and ABID97_RS10675 are separated by 77 nucleotidesABID97_RS10675 and ABID97_RS10680 are separated by 92 nucleotidesABID97_RS10680 and ABID97_RS10685 are separated by 12 nucleotides ABID97_RS10665: ABID97_RS10665 - HU family DNA-binding protein, at 2,218,191 to 2,218,463 _RS10665 ABID97_RS10670: ABID97_RS10670 - tRNA-Val, at 2,218,492 to 2,218,567 _RS10670 ABID97_RS10675: ABID97_RS10675 - SurA N-terminal domain-containing protein, at 2,218,645 to 2,220,555 _RS10675 ABID97_RS10680: ABID97_RS10680 - histidine phosphatase family protein, at 2,220,648 to 2,221,322 _RS10680 ABID97_RS10685: ABID97_RS10685 - hypothetical protein, at 2,221,335 to 2,221,667 _RS10685
Group Condition ABID97_RS10665 ABID97_RS10670 ABID97_RS10675 ABID97_RS10680 ABID97_RS10685
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -3.6 -1.1 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -3.3 -0.8 -1.0
carbon source L-Threonine (C) N.D. N.D. -0.4 -2.1 -2.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -3.2 -0.6 -0.9
carbon source L-Threonine (C) N.D. N.D. -0.3 -1.7 -2.5
plant outgrowth control Plant outgrowth control N.D. N.D. -2.9 -0.4 -0.3
carbon source L-Phenylalanine (C) N.D. N.D. -0.2 -1.2 -1.6
carbon source D-Arabinose (C) N.D. N.D. -0.3 -1.0 -1.4
carbon source L-Phenylalanine (C) N.D. N.D. -0.6 -0.8 -1.2
plant outgrowth control Plant outgrowth control N.D. N.D. -2.3 -0.1 -0.1
carbon source Tween 20 (C) N.D. N.D. -1.1 -0.6 -0.7
carbon source L-Malic (C) N.D. N.D. -0.5 -0.8 -1.0
carbon source D-Arabinose (C) N.D. N.D. -0.2 -0.9 -1.1
control NP N.D. N.D. -1.5 -0.5 -0.2
carbon source L-Malic (C) N.D. N.D. -0.7 -0.6 -0.9
r2a outgrowth control R2A outgrowth control N.D. N.D. -1.2 -0.5 -0.5
carbon source Tween 20 (C) N.D. N.D. -0.7 -0.6 -0.9
carbon source L-Arabinose (C) N.D. N.D. +0.4 -0.7 -1.0
carbon source Adenine (C) N.D. N.D. +0.7 -0.6 -1.2
carbon source D-Fructose (C) N.D. N.D. +0.8 -1.1 -0.8
carbon source D-Serine (C) N.D. N.D. +1.0 -0.7 -1.2
carbon source propionate (C) N.D. N.D. +0.9 -0.7 -1.2
carbon source butyrate (C) N.D. N.D. +0.8 -0.6 -1.0
carbon source D-Fructose (C) N.D. N.D. +0.9 -0.6 -0.9
carbon source D-Serine (C) N.D. N.D. +1.0 -0.7 -0.7
carbon source L-Tryptophan (C) N.D. N.D. +0.9 -0.4 -0.9
carbon source L-Fucose (C) N.D. N.D. +1.0 -0.6 -0.6
carbon source L-Histidine (C) N.D. N.D. +1.5 -0.6 -0.9
carbon source L-Histidine (C) N.D. N.D. +1.6 -0.5 -0.7
phage V2_100 N.D. N.D. +1.9 -0.2 +0.2
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ABID97_RS10665
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ABID97_RS10670
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