Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS10480 and ABID97_RS10485 overlap by 8 nucleotidesABID97_RS10485 and ABID97_RS10490 are separated by 31 nucleotidesABID97_RS10490 and ABID97_RS10495 are separated by 19 nucleotidesABID97_RS10495 and ABID97_RS10500 are separated by 91 nucleotides ABID97_RS10480: ABID97_RS10480 - ABC transporter ATP-binding protein, at 2,178,587 to 2,179,348 _RS10480 ABID97_RS10485: ABID97_RS10485 - ABC transporter ATP-binding protein, at 2,179,341 to 2,180,045 _RS10485 ABID97_RS10490: ABID97_RS10490 - tannase/feruloyl esterase family alpha/beta hydrolase, at 2,180,077 to 2,181,774 _RS10490 ABID97_RS10495: ABID97_RS10495 - DsbA family protein, at 2,181,794 to 2,182,528 _RS10495 ABID97_RS10500: ABID97_RS10500 - LysR family transcriptional regulator, at 2,182,620 to 2,183,537 _RS10500
Group Condition ABID97_RS10480 ABID97_RS10485 ABID97_RS10490 ABID97_RS10495 ABID97_RS10500
carbon source Glucuronamide (C) N.D. N.D. -0.1 -0.3 -1.3
carbon source L-Arabinose (C) N.D. N.D. -0.3 -0.3 -1.0
carbon source Fumarate (C) N.D. N.D. -0.3 -0.1 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.1 -0.7 -0.2
carbon source L-Fucose (C) N.D. N.D. +0.0 -0.4 -0.6
carbon source L-Alanine (C) N.D. N.D. -0.0 -1.1 +0.2
carbon source a-Ketoglutaric (C) N.D. N.D. -0.1 -0.7 -0.2
carbon source Tween 20 (C) N.D. N.D. -0.2 +0.2 -0.6
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.2 -0.5 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.2 -0.1 -0.5
carbon source D,L-Malic Acid (C) N.D. N.D. +0.1 -0.5 +0.3
carbon source D-Mannose (C) N.D. N.D. +0.1 +0.3 -0.4
carbon source L-Alanine (C) N.D. N.D. -0.1 +0.5 -0.3
phage V2_1 N.D. N.D. +0.0 +0.9 -0.7
plant outgrowth control Plant outgrowth control N.D. N.D. +0.3 -0.7 +0.7
carbon source Glycolic Acid (C) N.D. N.D. +0.2 -0.4 +0.5
carbon source D,L-Malic Acid (C) N.D. N.D. -0.4 +0.1 +0.6
carbon source D-Galactose (C) N.D. N.D. -0.0 +1.0 -0.7
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.3 +0.4 -0.2
carbon source D-Galactose (C) N.D. N.D. +0.0 +0.9 -0.4
carbon source D-Ribose (C) N.D. N.D. -0.1 +0.6 +0.2
carbon source D-Glucose (C) N.D. N.D. -0.0 +1.1 -0.3
carbon source propionate (C) N.D. N.D. +0.4 -0.3 +0.7
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.0 +0.5 +0.4
phage V2_10 N.D. N.D. -0.0 +1.0 -0.0
carbon source a-Ketoglutaric (C) N.D. N.D. +0.1 +0.5 +0.3
carbon source L-Glutamine (C) N.D. N.D. -0.1 +0.9 +0.2
phage V1_1 N.D. N.D. +0.1 +0.6 +0.2
control NP N.D. N.D. +0.2 +0.8 +0.1
carbon source L-tyrosine (C) N.D. N.D. -0.1 +0.9 +0.9
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