Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09885 and ABID97_RS09890 are separated by 347 nucleotidesABID97_RS09890 and ABID97_RS09895 are separated by 47 nucleotidesABID97_RS09895 and ABID97_RS09900 are separated by 53 nucleotidesABID97_RS09900 and ABID97_RS09905 are separated by 78 nucleotides ABID97_RS09885: ABID97_RS09885 - hypothetical protein, at 2,053,925 to 2,054,320 _RS09885 ABID97_RS09890: ABID97_RS09890 - class I SAM-dependent methyltransferase, at 2,054,668 to 2,056,263 _RS09890 ABID97_RS09895: ABID97_RS09895 - gamma-glutamyltransferase, at 2,056,311 to 2,058,047 _RS09895 ABID97_RS09900: ABID97_RS09900 - 16S rRNA pseudouridine(516) synthase, at 2,058,101 to 2,058,835 _RS09900 ABID97_RS09905: ABID97_RS09905 - YncE family protein, at 2,058,914 to 2,059,921 _RS09905
Group Condition ABID97_RS09885 ABID97_RS09890 ABID97_RS09895 ABID97_RS09900 ABID97_RS09905
carbon source D,L-Malic Acid (C) N.D. +0.0 +0.1 +0.5 -4.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 -0.1 -0.7 +0.1
carbon source L-Threonine (C) N.D. -0.1 -0.2 -0.5 -0.0
carbon source L-Threonine (C) N.D. +0.0 -0.1 -0.6 +0.1
carbon source L-Lactate (C) N.D. -0.1 -0.2 -0.3 -0.1
carbon source D-Gluconic Acid (C) N.D. -0.1 -0.2 -0.2 -0.1
carbon source Formate (C) N.D. +0.0 -0.2 -0.2 -0.2
carbon source D-Mannose (C) N.D. +0.1 -0.3 -0.1 -0.1
carbon source D-Galactose (C) N.D. +0.2 +0.0 -0.6 +0.0
carbon source Tween 20 (C) N.D. -0.1 -0.1 -0.3 +0.1
carbon source a-Ketoglutaric (C) N.D. -0.0 -0.2 -0.1 +0.1
r2a outgrowth control R2A outgrowth control N.D. -0.0 -0.1 -0.3 +0.1
phage V2_1 N.D. -0.1 +0.1 -0.4 +0.1
plant outgrowth control Plant outgrowth control N.D. -0.0 +0.0 -0.3 +0.2
carbon source L-Histidine (C) N.D. -0.2 +0.1 +0.2 -0.2
carbon source D-Glucose (C) N.D. +0.2 +0.1 -0.0 -0.2
carbon source Glycolic Acid (C) N.D. +0.2 +0.1 -0.1 -0.2
carbon source Ethanol (C) N.D. +0.2 -0.1 +0.1 -0.2
carbon source L-Arabinose (C) N.D. -0.0 -0.2 +0.3 +0.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 -0.3 +0.3 +0.1
phage V2_10 N.D. +0.2 +0.2 -0.2 +0.1
carbon source L-Malic (C) N.D. +0.2 -0.2 +0.1 +0.1
carbon source propionate (C) N.D. +0.0 +0.4 +0.0 -0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.2 +0.1 -0.1 +0.2
carbon source Gly-Glu (C) N.D. +0.1 -0.1 -0.0 +0.4
phage V2_100 N.D. +0.2 +0.0 -0.2 +0.3
carbon source D-Lactate (C) N.D. +0.2 -0.1 +0.1 +0.3
carbon source D,L-Malic Acid (C) N.D. -0.1 +0.1 +0.6 -0.0
carbon source Glucuronamide (C) N.D. +0.0 +0.0 +0.3 +0.2
carbon source butyrate (C) N.D. +0.1 +0.0 +0.4 +0.1
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ABID97_RS09885
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ABID97_RS09890
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