Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09520 and ABID97_RS09525 are separated by 67 nucleotidesABID97_RS09525 and ABID97_RS09530 overlap by 4 nucleotidesABID97_RS09530 and ABID97_RS09535 are separated by 225 nucleotidesABID97_RS09535 and ABID97_RS09540 are separated by 125 nucleotides ABID97_RS09520: ABID97_RS09520 - 3-phosphoserine/phosphohydroxythreonine transaminase, at 2,000,412 to 2,001,479 _RS09520 ABID97_RS09525: ABID97_RS09525 - DUF2059 domain-containing protein, at 2,001,547 to 2,002,137 _RS09525 ABID97_RS09530: ABID97_RS09530 - DNA gyrase subunit A, at 2,002,134 to 2,004,779 _RS09530 ABID97_RS09535: ABID97_RS09535 - outer membrane protein OmpA, at 2,005,005 to 2,005,661 _RS09535 ABID97_RS09540: ABID97_RS09540 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 2,005,787 to 2,006,494 _RS09540
Group Condition ABID97_RS09520 ABID97_RS09525 ABID97_RS09530 ABID97_RS09535 ABID97_RS09540
carbon source Tween 20 (C) N.D. -1.9 N.D. N.D. N.D.
carbon source Tween 20 (C) N.D. -1.6 N.D. N.D. N.D.
carbon source propionate (C) N.D. -1.4 N.D. N.D. N.D.
carbon source Glycolic Acid (C) N.D. -1.2 N.D. N.D. N.D.
carbon source L-Threonine (C) N.D. -1.0 N.D. N.D. N.D.
carbon source propionate (C) N.D. -1.0 N.D. N.D. N.D.
carbon source L-Proline (C) N.D. -0.9 N.D. N.D. N.D.
carbon source Adenine (C) N.D. -0.9 N.D. N.D. N.D.
carbon source Adenine (C) N.D. -0.9 N.D. N.D. N.D.
carbon source D-Mannose (C) N.D. -0.7 N.D. N.D. N.D.
carbon source L-Asparagine (C) N.D. -0.6 N.D. N.D. N.D.
carbon source D-Arabinose (C) N.D. -0.6 N.D. N.D. N.D.
carbon source D-Arabinose (C) N.D. -0.6 N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) N.D. -0.5 N.D. N.D. N.D.
carbon source L-Threonine (C) N.D. -0.5 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. -0.4 N.D. N.D. N.D.
phage V1_1 N.D. -0.4 N.D. N.D. N.D.
carbon source L-tyrosine (C) N.D. -0.4 N.D. N.D. N.D.
carbon source D-Fructose (C) N.D. +0.4 N.D. N.D. N.D.
carbon source Glucuronamide (C) N.D. +0.4 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.4 N.D. N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.4 N.D. N.D. N.D.
carbon source Glycerol (C) N.D. +0.4 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. +0.4 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. +0.5 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.5 N.D. N.D. N.D.
carbon source L-Histidine (C) N.D. +0.5 N.D. N.D. N.D.
carbon source L-Malic (C) N.D. +0.5 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) N.D. +0.7 N.D. N.D. N.D.
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ABID97_RS09520
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ABID97_RS09525
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ABID97_RS09535
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ABID97_RS09540
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