Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09485 and ABID97_RS09490 overlap by 11 nucleotidesABID97_RS09490 and ABID97_RS09495 are separated by 54 nucleotidesABID97_RS09495 and ABID97_RS09500 are separated by 71 nucleotidesABID97_RS09500 and ABID97_RS09505 are separated by 230 nucleotides ABID97_RS09485: ABID97_RS09485 - lipopolysaccharide assembly protein LapB, at 1,992,472 to 1,993,650 _RS09485 ABID97_RS09490: ABID97_RS09490 - LapA family protein, at 1,993,640 to 1,993,981 _RS09490 ABID97_RS09495: ABID97_RS09495 - integration host factor subunit beta, at 1,994,036 to 1,994,362 _RS09495 ABID97_RS09500: ABID97_RS09500 - 30S ribosomal protein S1, at 1,994,434 to 1,996,122 _RS09500 ABID97_RS09505: ABID97_RS09505 - bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase, at 1,996,353 to 1,998,365 _RS09505
Group Condition ABID97_RS09485 ABID97_RS09490 ABID97_RS09495 ABID97_RS09500 ABID97_RS09505
carbon source D-Glucose (C) N.D. -3.0 N.D. N.D. N.D.
carbon source L-Histidine (C) N.D. -2.9 N.D. N.D. N.D.
carbon source L-Fucose (C) N.D. -2.3 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -2.3 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.8 N.D. N.D. N.D.
phage V1_10 N.D. -1.6 N.D. N.D. N.D.
carbon source L-Leucine (C) N.D. -1.4 N.D. N.D. N.D.
carbon source Tween 20 (C) N.D. -1.4 N.D. N.D. N.D.
carbon source D-Ribose (C) N.D. -1.2 N.D. N.D. N.D.
carbon source L-Tryptophan (C) N.D. -1.2 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) N.D. -1.1 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) N.D. -1.1 N.D. N.D. N.D.
carbon source L-Leucine (C) N.D. -1.0 N.D. N.D. N.D.
carbon source D-Mannose (C) N.D. -0.9 N.D. N.D. N.D.
carbon source Adenine (C) N.D. -0.8 N.D. N.D. N.D.
carbon source D-Glucuronic Acid (C) N.D. -0.8 N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) N.D. +0.8 N.D. N.D. N.D.
carbon source D-Sorbitol (C) N.D. +0.8 N.D. N.D. N.D.
phage V2_100 N.D. +0.9 N.D. N.D. N.D.
carbon source Glucuronamide (C) N.D. +0.9 N.D. N.D. N.D.
carbon source butyrate (C) N.D. +1.0 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. +1.0 N.D. N.D. N.D.
carbon source D,L-Lactate (C) N.D. +1.1 N.D. N.D. N.D.
carbon source Fumarate (C) N.D. +1.3 N.D. N.D. N.D.
carbon source D-Arabinose (C) N.D. +1.3 N.D. N.D. N.D.
carbon source succinate (C) N.D. +1.4 N.D. N.D. N.D.
carbon source L-Glutamic (C) N.D. +1.5 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) N.D. +1.5 N.D. N.D. N.D.
carbon source butyrate (C) N.D. +1.9 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. +1.9 N.D. N.D. N.D.
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ABID97_RS09485
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