Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09405 and ABID97_RS09410 are separated by 58 nucleotidesABID97_RS09410 and ABID97_RS09415 are separated by 24 nucleotidesABID97_RS09415 and ABID97_RS09420 are separated by 33 nucleotidesABID97_RS09420 and ABID97_RS09425 are separated by 16 nucleotides ABID97_RS09405: ABID97_RS09405 - xanthine dehydrogenase family protein subunit M, at 1,977,546 to 1,978,337 _RS09405 ABID97_RS09410: ABID97_RS09410 - MoxR family ATPase, at 1,978,396 to 1,979,298 _RS09410 ABID97_RS09415: ABID97_RS09415 - VWA domain-containing protein, at 1,979,323 to 1,980,537 _RS09415 ABID97_RS09420: ABID97_RS09420 - carbon monoxide dehydrogenase subunit G, at 1,980,571 to 1,981,209 _RS09420 ABID97_RS09425: ABID97_RS09425 - XdhC family protein, at 1,981,226 to 1,982,248 _RS09425
Group Condition ABID97_RS09405 ABID97_RS09410 ABID97_RS09415 ABID97_RS09420 ABID97_RS09425
carbon source butyrate (C) -4.3 -0.2 -0.3 -0.1 -0.4
carbon source 2-Deoxy-D-Ribose (C) -2.2 -0.1 -0.2 -1.1 -0.9
carbon source L-Histidine (C) -4.6 +0.1 +0.5 -0.1 -0.2
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.6 -0.4 -1.3 -1.3
carbon source L-tyrosine (C) -1.0 -0.3 -0.1 -1.2 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.7 -0.8 -0.8 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.4 -0.6 -0.8 -1.3
carbon source L-Fucose (C) -1.2 -0.1 -0.3 -0.0 -0.4
carbon source L-Arabinose (C) -1.9 -0.2 +0.1 -0.1 +0.1
carbon source D-Mannose (C) -1.5 -0.1 +0.1 -0.1 -0.3
carbon source D-Mannose (C) -1.7 +0.0 -0.1 -0.0 +0.2
carbon source Ethanol (C) -0.8 -0.5 -0.1 -0.2 +0.0
carbon source butyrate (C) -0.2 -0.4 -0.3 -0.2 -0.5
carbon source L-Leucine (C) -0.6 -0.1 -0.2 -0.2 -0.4
carbon source L-Arabinose (C) -0.9 +0.0 -0.4 +0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.8 -0.1 +0.3 +0.0 +0.2
phage V2_100 -0.6 +0.7 -0.2 +0.2 -0.4
carbon source Tween 20 (C) +0.5 -0.2 -0.2 -0.5 +0.1
carbon source Adenine (C) -0.7 +0.1 -0.1 +0.1 +0.4
carbon source L-Threonine (C) -0.7 +0.2 -0.4 +0.2 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 -0.2 +0.0 -0.7 +0.0
plant outgrowth control Plant outgrowth control +1.0 -0.3 -0.2 -0.4 +0.1
carbon source D-Glucuronic Acid (C) -0.8 -0.3 +1.3 +0.2 -0.0
carbon source D-Gluconic Acid (C) +0.9 -0.0 +0.1 -0.1 -0.2
carbon source Adenine (C) -0.0 -0.2 -0.3 +0.4 +0.8
phage V2_10 +1.0 +0.1 -0.0 +0.1 -0.3
carbon source L-Phenylalanine (C) +0.6 +0.1 -0.1 +0.3 +0.4
carbon source D-Arabinose (C) +0.2 +0.1 +0.2 +0.4 +0.5
carbon source D-Serine (C) +0.4 +0.1 +0.3 +0.4 +0.3
carbon source D-Arabinose (C) +0.8 +0.3 +0.2 +0.3 +0.5
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