Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09375 and ABID97_RS09380 overlap by 4 nucleotidesABID97_RS09380 and ABID97_RS09385 are separated by 116 nucleotidesABID97_RS09385 and ABID97_RS09390 are separated by 4 nucleotidesABID97_RS09390 and ABID97_RS09395 are separated by 182 nucleotides ABID97_RS09375: ABID97_RS09375 - ATP-binding cassette domain-containing protein, at 1,971,170 to 1,971,889 _RS09375 ABID97_RS09380: ABID97_RS09380 - substrate-binding domain-containing protein, at 1,971,886 to 1,972,743 _RS09380 ABID97_RS09385: ABID97_RS09385 - nuclear transport factor 2 family protein, at 1,972,860 to 1,973,237 _RS09385 ABID97_RS09390: ABID97_RS09390 - helix-turn-helix domain-containing protein, at 1,973,242 to 1,974,381 _RS09390 ABID97_RS09395: ABID97_RS09395 - (2Fe-2S)-binding protein, at 1,974,564 to 1,975,061 _RS09395
Group Condition ABID97_RS09375 ABID97_RS09380 ABID97_RS09385 ABID97_RS09390 ABID97_RS09395
carbon source L-tyrosine (C) +0.1 -0.5 -0.8 -0.2 N.D.
carbon source L-Alanine (C) +0.3 +0.1 -0.3 -0.8 N.D.
carbon source L-Arabinose (C) +0.1 -0.1 -0.7 +0.3 N.D.
r2a outgrowth control R2A outgrowth control +0.1 -0.5 -0.5 +0.6 N.D.
carbon source casaminos (C) +0.2 +0.3 +0.1 -0.8 N.D.
carbon source L-Asparagine (C) +0.6 -0.1 -0.1 -0.5 N.D.
carbon source propionate (C) -0.2 -0.3 -0.1 +0.7 N.D.
carbon source Glucuronamide (C) +0.3 -0.3 +0.4 -0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 -0.5 -0.4 +0.2 N.D.
plant outgrowth control Plant outgrowth control +0.5 -0.1 -0.4 +0.3 N.D.
carbon source Glucuronamide (C) +0.8 -0.2 -0.4 +0.1 N.D.
carbon source D-Xylose (C) +0.5 -0.2 -0.2 +0.4 N.D.
carbon source L-Asparagine (C) +0.3 +0.1 +0.4 -0.4 N.D.
phage V2_100 -0.2 -0.1 +0.9 -0.1 N.D.
carbon source L-Alanine (C) -0.3 +0.2 +0.2 +0.5 N.D.
carbon source L-Fucose (C) +0.4 +0.1 +0.6 -0.5 N.D.
carbon source L-Fucose (C) -0.2 -0.1 +0.1 +0.9 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.5 +0.3 +0.4 -0.2 N.D.
carbon source D-Galactose (C) +0.2 +0.1 +0.8 -0.2 N.D.
carbon source Ethanol (C) +0.4 +0.4 -0.2 +0.3 N.D.
carbon source L-Lactate (C) +0.7 -0.1 +0.3 +0.1 N.D.
carbon source D,L-Malic Acid (C) +0.2 +0.5 +0.4 -0.2 N.D.
carbon source L-Phenylalanine (C) +0.4 -0.1 +0.3 +0.4 N.D.
carbon source D-Fructose (C) +0.4 -0.3 +0.6 +0.3 N.D.
carbon source acetate (C) +0.3 +0.3 +0.4 +0.3 N.D.
r2a outgrowth control R2A outgrowth control +0.4 +0.0 +0.3 +0.6 N.D.
carbon source propionate (C) +0.4 +0.2 +0.3 +0.6 N.D.
carbon source D-Glucose (C) +0.4 +0.0 +0.5 +0.4 N.D.
carbon source L-Glutamine (C) +0.4 +0.2 +0.5 +0.5 N.D.
carbon source Tween 20 (C) +0.7 +0.0 +0.3 +0.6 N.D.
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