Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09360 and ABID97_RS09365 overlap by 4 nucleotidesABID97_RS09365 and ABID97_RS09370 are separated by 96 nucleotidesABID97_RS09370 and ABID97_RS09375 overlap by 4 nucleotidesABID97_RS09375 and ABID97_RS09380 overlap by 4 nucleotides ABID97_RS09360: ABID97_RS09360 - Zn-dependent hydrolase, at 1,967,593 to 1,968,849 _RS09360 ABID97_RS09365: ABID97_RS09365 - M81 family metallopeptidase, at 1,968,846 to 1,970,318 _RS09365 ABID97_RS09370: ABID97_RS09370 - ABC transporter permease, at 1,970,415 to 1,971,173 _RS09370 ABID97_RS09375: ABID97_RS09375 - ATP-binding cassette domain-containing protein, at 1,971,170 to 1,971,889 _RS09375 ABID97_RS09380: ABID97_RS09380 - substrate-binding domain-containing protein, at 1,971,886 to 1,972,743 _RS09380
Group Condition ABID97_RS09360 ABID97_RS09365 ABID97_RS09370 ABID97_RS09375 ABID97_RS09380
carbon source Glucuronamide (C) -0.3 -0.2 N.D. +0.3 -0.3
phage V2_10 +0.4 -0.5 N.D. +0.1 -0.1
carbon source L-tyrosine (C) -0.2 +0.4 N.D. +0.1 -0.5
carbon source D-Mannose (C) -0.1 -0.4 N.D. +0.5 -0.1
phage V1_10 +0.1 -0.5 N.D. +0.4 -0.1
carbon source propionate (C) -0.1 +0.7 N.D. -0.2 -0.3
r2a outgrowth control R2A outgrowth control +0.2 +0.2 N.D. +0.1 -0.5
plant outgrowth control Plant outgrowth control +0.2 -0.4 N.D. +0.5 -0.1
carbon source Glucuronamide (C) +0.1 -0.1 N.D. +0.8 -0.2
carbon source L-Phenylalanine (C) +0.0 +0.2 N.D. +0.6 -0.1
carbon source D-Xylose (C) +0.0 +0.5 N.D. +0.5 -0.2
carbon source L-Leucine (C) +0.4 +0.2 N.D. -0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.4 N.D. +1.1 -0.5
carbon source L-tyrosine (C) -0.0 +0.3 N.D. +0.5 +0.0
carbon source D-Fructose (C) +0.4 +0.4 N.D. +0.4 -0.3
carbon source Ethanol (C) -0.2 +0.3 N.D. +0.4 +0.4
carbon source D,L-Malic Acid (C) -0.1 +0.3 N.D. +0.2 +0.5
carbon source L-Histidine (C) +0.3 +0.7 N.D. +0.1 -0.1
carbon source L-Glutamine (C) +0.2 +0.3 N.D. +0.4 +0.2
carbon source D-Lactate (C) +0.3 +0.5 N.D. +0.1 +0.1
carbon source Adenine (C) +0.1 +0.3 N.D. +0.6 +0.0
carbon source L-Alanine (C) +0.2 +0.5 N.D. +0.3 +0.1
carbon source L-Glutamic (C) +0.1 +0.4 N.D. +0.5 +0.1
carbon source L-Lactate (C) +0.2 +0.2 N.D. +0.6 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.2 +0.6 N.D. +0.4 -0.2
carbon source acetate (C) +0.2 +0.4 N.D. +0.3 +0.3
carbon source propionate (C) +0.4 +0.3 N.D. +0.4 +0.2
carbon source D-Ribose (C) +0.4 +0.5 N.D. +0.2 +0.2
carbon source D,L-Malic Acid (C) +0.2 +0.6 N.D. +0.6 +0.0
carbon source 2-Deoxy-D-Ribose (C) +0.4 +0.7 N.D. +0.5 +0.3
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