Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS09310 and ABID97_RS09315 are separated by 32 nucleotidesABID97_RS09315 and ABID97_RS09320 are separated by 71 nucleotidesABID97_RS09320 and ABID97_RS09325 are separated by 108 nucleotidesABID97_RS09325 and ABID97_RS09330 are separated by 36 nucleotides ABID97_RS09310: ABID97_RS09310 - MFS transporter, at 1,956,914 to 1,958,356 _RS09310 ABID97_RS09315: ABID97_RS09315 - substrate-binding domain-containing protein, at 1,958,389 to 1,959,495 _RS09315 ABID97_RS09320: ABID97_RS09320 - aspartate aminotransferase family protein, at 1,959,567 to 1,960,922 _RS09320 ABID97_RS09325: ABID97_RS09325 - LysR family transcriptional regulator, at 1,961,031 to 1,961,999 _RS09325 ABID97_RS09330: ABID97_RS09330 - FCD domain-containing protein, at 1,962,036 to 1,962,821 _RS09330
Group Condition ABID97_RS09310 ABID97_RS09315 ABID97_RS09320 ABID97_RS09325 ABID97_RS09330
carbon source L-Alanine (C) -0.2 -2.1 -0.1 N.D. +0.2
carbon source Glucuronamide (C) -0.2 -1.8 +0.1 N.D. +0.1
carbon source Formate (C) +0.2 -0.9 -0.0 N.D. +0.2
phage V2_10 +0.1 -0.0 +0.4 N.D. -0.8
carbon source D-Ribose (C) -0.1 -0.5 -0.1 N.D. +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -1.0 +0.1 N.D. +0.5
carbon source D-Glucose (C) -0.4 -0.4 -0.2 N.D. +0.9
carbon source L-Histidine (C) +0.3 -0.5 -0.2 N.D. +0.4
carbon source L-Glutamine (C) -0.2 +0.7 -0.2 N.D. +0.1
carbon source propionate (C) +0.3 -0.7 +0.2 N.D. +0.7
carbon source butyrate (C) -0.3 +0.6 -0.2 N.D. +0.4
carbon source Ethanol (C) -0.0 -0.3 -0.3 N.D. +1.2
carbon source D-Arabinose (C) -0.2 -0.2 -0.2 N.D. +1.2
carbon source D-Ribose (C) +0.1 +0.3 -0.3 N.D. +0.5
carbon source D-Xylose (C) -0.0 +0.7 -0.3 N.D. +0.4
carbon source L-tyrosine (C) -0.1 +0.8 -0.3 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.5 -0.2 N.D. +0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +1.0 -0.3 N.D. +0.2
carbon source L-Alanine (C) -0.3 +1.0 -0.2 N.D. +0.3
carbon source D-Arabinose (C) -0.2 +0.2 -0.4 N.D. +1.2
carbon source D-Glucuronic Acid (C) -0.0 +0.2 -0.2 N.D. +1.0
carbon source L-Leucine (C) +0.2 +0.4 -0.2 N.D. +0.7
carbon source D-Mannose (C) +0.1 +0.2 -0.0 N.D. +0.8
carbon source Ethanol (C) +0.0 +0.5 -0.4 N.D. +1.1
carbon source Fumarate (C) +0.2 +0.8 -0.1 N.D. +0.2
carbon source D-Mannose (C) +0.0 +0.4 +0.2 N.D. +0.7
carbon source L-Leucine (C) +0.1 +0.5 +0.0 N.D. +0.7
carbon source D-Gluconic Acid (C) +0.1 +0.5 -0.2 N.D. +1.1
carbon source butyrate (C) -0.2 +1.3 -0.3 N.D. +0.7
carbon source D-Gluconic Acid (C) -0.1 +0.7 -0.2 N.D. +1.4
remove
ABID97_RS09310
plot		 remove
ABID97_RS09315
plot		 remove
ABID97_RS09320		 remove
ABID97_RS09325
plot		 remove
ABID97_RS09330
plot