Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09200 and ABID97_RS09205 are separated by 16 nucleotidesABID97_RS09205 and ABID97_RS09210 are separated by 113 nucleotidesABID97_RS09210 and ABID97_RS09215 are separated by 99 nucleotidesABID97_RS09215 and ABID97_RS09220 are separated by 125 nucleotides ABID97_RS09200: ABID97_RS09200 - transporter substrate-binding domain-containing protein, at 1,935,847 to 1,936,734 _RS09200 ABID97_RS09205: ABID97_RS09205 - amino acid racemase, at 1,936,751 to 1,937,491 _RS09205 ABID97_RS09210: ABID97_RS09210 - dienelactone hydrolase family protein, at 1,937,605 to 1,938,504 _RS09210 ABID97_RS09215: ABID97_RS09215 - ZIP family metal transporter, at 1,938,604 to 1,939,539 _RS09215 ABID97_RS09220: ABID97_RS09220 - hypothetical protein, at 1,939,665 to 1,939,880 _RS09220
Group Condition ABID97_RS09200 ABID97_RS09205 ABID97_RS09210 ABID97_RS09215 ABID97_RS09220
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -0.8 -0.2 N.D. +0.0
carbon source D,L-Malic Acid (C) -0.4 -0.3 -0.3 N.D. -0.3
carbon source L-Alanine (C) +0.1 -0.5 +0.1 N.D. -0.7
carbon source D-Glucuronic Acid (C) +0.1 -0.1 -0.4 N.D. -0.6
phage V1_1 +0.0 -0.4 -0.1 N.D. -0.4
carbon source D-Arabinose (C) +0.1 -0.2 -0.4 N.D. -0.4
carbon source propionate (C) +0.1 +0.2 -0.2 N.D. -1.0
carbon source D-Serine (C) +0.1 -0.4 -0.3 N.D. -0.1
phage V2_100 +0.1 -0.1 -0.5 N.D. -0.1
carbon source casaminos (C) +0.2 -0.5 -0.1 N.D. -0.1
carbon source Glucuronamide (C) -0.0 +0.1 +0.2 N.D. -0.8
carbon source Glycolic Acid (C) +0.1 -0.0 +0.0 N.D. -0.7
carbon source butyrate (C) +0.4 -0.7 +0.1 N.D. -0.1
carbon source L-Arabinose (C) -0.1 -0.6 -0.1 N.D. +0.5
carbon source L-tyrosine (C) +0.0 -0.5 +0.1 N.D. +0.2
carbon source L-Alanine (C) -0.1 -0.1 +0.6 N.D. -0.4
carbon source L-Histidine (C) +0.1 -0.4 -0.1 N.D. +0.4
carbon source Adenine (C) +0.2 +0.3 +0.0 N.D. -0.5
carbon source 2-Deoxy-D-Ribose (C) +0.4 +0.2 -0.0 N.D. -0.4
r2a outgrowth control R2A outgrowth control +0.3 -0.1 +0.3 N.D. -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.2 -0.0 N.D. -0.1
carbon source propionate (C) +0.6 -0.6 -0.1 N.D. +0.5
phage V1_10 +0.1 +0.2 -0.4 N.D. +0.4
carbon source D-Fructose (C) +0.2 -0.3 -0.1 N.D. +0.6
carbon source Adenine (C) +0.6 -0.2 +0.1 N.D. +0.0
carbon source D-Mannose (C) -0.1 +0.1 -0.0 N.D. +0.7
carbon source Gly-Glu (C) +0.1 +0.3 -0.1 N.D. +0.4
carbon source Formate (C) +0.3 +0.2 -0.1 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.0 +0.2 N.D. +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.5 -0.0 N.D. +0.1
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