Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09185 and ABID97_RS09190 are separated by 7 nucleotidesABID97_RS09190 and ABID97_RS09195 are separated by 3 nucleotidesABID97_RS09195 and ABID97_RS09200 are separated by 229 nucleotidesABID97_RS09200 and ABID97_RS09205 are separated by 16 nucleotides ABID97_RS09185: ABID97_RS09185 - M20/M25/M40 family metallo-hydrolase, at 1,932,197 to 1,933,483 _RS09185 ABID97_RS09190: ABID97_RS09190 - LysR substrate-binding domain-containing protein, at 1,933,491 to 1,934,393 _RS09190 ABID97_RS09195: ABID97_RS09195 - D-amino acid dehydrogenase, at 1,934,397 to 1,935,617 _RS09195 ABID97_RS09200: ABID97_RS09200 - transporter substrate-binding domain-containing protein, at 1,935,847 to 1,936,734 _RS09200 ABID97_RS09205: ABID97_RS09205 - amino acid racemase, at 1,936,751 to 1,937,491 _RS09205
Group Condition ABID97_RS09185 ABID97_RS09190 ABID97_RS09195 ABID97_RS09200 ABID97_RS09205
carbon source D,L-Malic Acid (C) -0.2 -0.4 -0.7 +0.4 -0.2
r2a outgrowth control R2A outgrowth control -0.7 -0.1 -0.2 +0.0 -0.1
carbon source L-tyrosine (C) -0.4 -0.2 +0.1 +0.0 -0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.7 -0.3 -0.2 -0.4 -0.8
carbon source L-Tryptophan (C) +0.2 -0.2 -0.7 +0.0 -0.2
carbon source L-Malic (C) -0.8 +0.1 -0.2 -0.0 +0.1
carbon source D-Arabinose (C) -0.5 -0.4 +0.1 +0.1 -0.2
carbon source L-Alanine (C) -0.1 +0.3 -0.6 +0.1 -0.5
carbon source L-Tryptophan (C) +0.0 +0.1 -0.7 +0.2 -0.3
carbon source L-Arabinose (C) -0.3 +0.2 +0.0 -0.1 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.9 +0.1 +0.6 -0.2
carbon source Gly-Glu (C) -0.8 +0.1 +0.3 -0.2 -0.1
carbon source L-Asparagine (C) -0.2 +0.2 -0.6 +0.1 -0.2
carbon source Fumarate (C) +0.2 -0.3 -0.5 +0.3 -0.4
carbon source casaminos (C) +0.4 -0.2 -0.3 +0.2 -0.5
carbon source D-Fructose (C) -0.1 +0.2 -0.3 +0.2 -0.3
carbon source Gly-Glu (C) -1.0 +0.3 +0.1 +0.1 +0.3
carbon source D-Glucose (C) +0.2 -0.3 -0.2 +0.4 -0.1
carbon source D-Sorbitol (C) +0.1 -0.5 -0.1 +0.3 +0.2
carbon source propionate (C) -0.1 +0.2 +0.1 +0.6 -0.6
carbon source Adenine (C) +0.2 +0.1 -0.3 +0.6 -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.3 -0.1 +0.4 +0.2
carbon source Glucuronamide (C) -0.2 +0.5 +0.2 +0.1 -0.2
carbon source butyrate (C) +0.2 -0.4 +0.9 +0.4 -0.7
carbon source L-Lactate (C) +0.5 -0.3 -0.1 +0.3 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.2 -0.1 +0.6 +0.5
carbon source Adenine (C) +0.3 +0.2 -0.2 +0.2 +0.3
carbon source D-Xylose (C) +0.4 -0.1 +0.1 +0.5 +0.0
carbon source propionate (C) +0.6 +0.3 -0.1 +0.1 +0.2
carbon source butyrate (C) -0.2 +0.4 +0.6 +0.3 +0.1
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ABID97_RS09185
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ABID97_RS09190
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ABID97_RS09200
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ABID97_RS09205
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