Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS09145 and ABID97_RS09150 are separated by 57 nucleotidesABID97_RS09150 and ABID97_RS09155 are separated by 133 nucleotidesABID97_RS09155 and ABID97_RS09160 overlap by 4 nucleotidesABID97_RS09160 and ABID97_RS09165 are separated by 18 nucleotides ABID97_RS09145: ABID97_RS09145 - azurin, at 1,918,560 to 1,919,012 _RS09145 ABID97_RS09150: ABID97_RS09150 - UvrD-helicase domain-containing protein, at 1,919,070 to 1,921,502 _RS09150 ABID97_RS09155: ABID97_RS09155 - DUF2339 domain-containing protein, at 1,921,636 to 1,925,391 _RS09155 ABID97_RS09160: ABID97_RS09160 - DUF3999 domain-containing protein, at 1,925,388 to 1,926,929 _RS09160 ABID97_RS09165: ABID97_RS09165 - BPSS1780 family membrane protein, at 1,926,948 to 1,927,778 _RS09165
Group Condition ABID97_RS09145 ABID97_RS09150 ABID97_RS09155 ABID97_RS09160 ABID97_RS09165
carbon source L-Threonine (C) -0.0 -1.9 +0.0 -0.2 +0.1
phage V2_10 -0.3 -0.9 +0.0 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.8 +0.0 -0.0 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -1.3 +0.1 +0.3 -0.1
carbon source L-Threonine (C) +0.3 -1.5 +0.0 +0.0 +0.1
carbon source L-Histidine (C) -0.0 -1.2 +0.1 -0.1 +0.3
carbon source L-Glutamine (C) -0.0 -1.1 +0.0 +0.2 +0.1
carbon source L-tyrosine (C) -0.2 -0.7 +0.1 -0.1 +0.2
carbon source L-Fucose (C) -0.0 -0.8 -0.0 -0.2 +0.2
phage V2_1 +0.0 -0.6 -0.0 +0.2 -0.3
phage V2_10 -0.3 -0.3 -0.1 +0.2 -0.2
carbon source L-Histidine (C) -0.0 -0.9 +0.1 +0.1 +0.1
carbon source D-Glucose (C) +0.1 -0.6 -0.1 +0.1 -0.1
carbon source D-Galactose (C) -0.0 -0.7 +0.1 -0.1 +0.2
carbon source L-Glutamine (C) -0.0 -0.7 +0.0 -0.1 +0.2
carbon source L-Lactate (C) -0.2 -0.5 +0.1 -0.2 +0.2
carbon source D,L-Malic Acid (C) +0.3 -0.6 -0.4 +0.4 -0.2
carbon source D-Galactose (C) +0.3 -0.4 +0.0 -0.4 +0.1
carbon source L-Glutamic (C) +0.2 -0.9 -0.0 +0.1 +0.2
carbon source casaminos (C) +0.1 -0.5 +0.0 -0.2 +0.2
carbon source acetate (C) +0.3 -0.6 +0.2 -0.1 -0.0
carbon source L-Malic (C) +0.1 -0.6 -0.0 +0.2 -0.0
carbon source Glycolic Acid (C) +0.1 -0.8 +0.2 +0.2 +0.1
carbon source Glycolic Acid (C) +0.3 -0.5 +0.0 -0.2 +0.2
carbon source Glycerol (C) +0.3 -0.6 +0.1 -0.1 +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.6 +0.1 -0.0 +0.3
carbon source L-Tryptophan (C) +0.1 -0.5 +0.1 -0.0 +0.4
carbon source L-Alanine (C) -0.2 -0.3 +0.6 +0.2 +0.2
carbon source propionate (C) +0.1 +0.5 -0.1 +0.1 +0.3
carbon source butyrate (C) +0.3 +0.4 -0.1 +0.3 +0.1
remove
ABID97_RS09145
plot		 remove
ABID97_RS09150
plot		 remove
ABID97_RS09155		 remove
ABID97_RS09160
plot		 remove
ABID97_RS09165
plot