Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS09090 and ABID97_RS09095 overlap by 4 nucleotidesABID97_RS09095 and ABID97_RS09100 are separated by 29 nucleotidesABID97_RS09100 and ABID97_RS09105 are separated by 52 nucleotidesABID97_RS09105 and ABID97_RS09110 are separated by 8 nucleotides ABID97_RS09090: ABID97_RS09090 - TadE family protein, at 1,908,003 to 1,908,461 _RS09090 ABID97_RS09095: ABID97_RS09095 - TadE/TadG family type IV pilus assembly protein, at 1,908,458 to 1,908,907 _RS09095 ABID97_RS09100: ABID97_RS09100 - AAA family ATPase, at 1,908,937 to 1,910,088 _RS09100 ABID97_RS09105: ABID97_RS09105 - CpaF family protein, at 1,910,141 to 1,911,514 _RS09105 ABID97_RS09110: ABID97_RS09110 - type II secretion system F family protein, at 1,911,523 to 1,912,515 _RS09110
Group Condition ABID97_RS09090 ABID97_RS09095 ABID97_RS09100 ABID97_RS09105 ABID97_RS09110
carbon source L-Alanine (C) -0.6 -0.9 N.D. -0.7 +0.2
phage V2_100 -0.3 -0.6 N.D. -0.2 -0.5
phage V1_1 -0.2 -0.7 N.D. -0.3 -0.1
carbon source D-Fructose (C) +0.1 -0.3 N.D. -0.3 -0.6
carbon source L-Proline (C) -0.4 +0.0 N.D. +0.1 -0.6
carbon source Glucuronamide (C) +0.1 -0.4 N.D. -0.2 -0.5
carbon source acetate (C) -0.8 -0.2 N.D. -0.3 +0.4
carbon source butyrate (C) -0.8 -0.4 N.D. -0.1 +0.6
carbon source L-Lactate (C) +0.1 -0.8 N.D. -0.2 +0.2
carbon source butyrate (C) +0.4 -0.1 N.D. -0.4 -0.5
carbon source Tween 20 (C) -0.6 +0.2 N.D. -0.4 +0.3
carbon source succinate (C) -0.6 +0.1 N.D. -0.3 +0.4
carbon source casaminos (C) -0.2 +0.5 N.D. -0.4 -0.2
carbon source Fumarate (C) -0.1 +0.6 N.D. -0.4 -0.3
plant outgrowth control Plant outgrowth control +0.3 -0.6 N.D. -0.3 +0.4
carbon source D-Lactate (C) -0.2 +0.0 N.D. -0.4 +0.5
carbon source L-Leucine (C) +0.4 -0.3 N.D. -0.4 +0.2
carbon source Adenine (C) +0.3 -0.6 N.D. -0.0 +0.2
carbon source propionate (C) -0.4 +0.4 N.D. -0.2 +0.1
carbon source D-Arabinose (C) +0.1 -0.5 N.D. +0.2 +0.3
carbon source L-Phenylalanine (C) -0.4 +0.3 N.D. -0.1 +0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.2 N.D. -0.2 +0.4
carbon source L-Tryptophan (C) -0.4 +0.5 N.D. -0.1 +0.5
carbon source L-Threonine (C) -0.2 +0.5 N.D. +0.1 +0.4
carbon source D-Galactose (C) +0.5 +0.5 N.D. +0.2 -0.1
carbon source D-Fructose (C) +0.3 +0.5 N.D. -0.2 +0.6
carbon source L-Proline (C) +0.2 +0.5 N.D. -0.1 +0.7
carbon source D-Ribose (C) +0.7 +0.7 N.D. -0.0 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.6 N.D. -0.0 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.8 -0.2 N.D. +0.2 +0.1
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ABID97_RS09090
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ABID97_RS09095
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ABID97_RS09105
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ABID97_RS09110
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