Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08955 and ABID97_RS08960 are separated by 129 nucleotidesABID97_RS08960 and ABID97_RS08965 are separated by 128 nucleotidesABID97_RS08965 and ABID97_RS08970 are separated by 79 nucleotidesABID97_RS08970 and ABID97_RS08975 overlap by 1 nucleotides ABID97_RS08955: ABID97_RS08955 - type VI secretion system contractile sheath large subunit, at 1,876,544 to 1,878,040 _RS08955 ABID97_RS08960: ABID97_RS08960 - type VI secretion system tube protein Hcp, at 1,878,170 to 1,878,655 _RS08960 ABID97_RS08965: ABID97_RS08965 - type VI secretion system baseplate subunit TssK, at 1,878,784 to 1,880,139 _RS08965 ABID97_RS08970: ABID97_RS08970 - type VI secretion system tip protein TssI/VgrG, at 1,880,219 to 1,882,798 _RS08970 ABID97_RS08975: ABID97_RS08975 - DUF4123 domain-containing protein, at 1,882,798 to 1,883,736 _RS08975
Group Condition ABID97_RS08955 ABID97_RS08960 ABID97_RS08965 ABID97_RS08970 ABID97_RS08975
carbon source L-Histidine (C) -0.2 N.D. -1.0 N.D. -0.5
carbon source a-Ketoglutaric (C) -0.2 N.D. -0.5 N.D. -0.6
plant outgrowth control Plant outgrowth control -0.1 N.D. -0.7 N.D. -0.2
carbon source L-tyrosine (C) -0.2 N.D. -1.1 N.D. +0.4
phage V2_1 -0.3 N.D. -0.4 N.D. -0.2
control NP -0.1 N.D. -0.6 N.D. -0.2
carbon source D-Galactose (C) +0.0 N.D. +0.1 N.D. -0.8
carbon source D-Ribose (C) -0.1 N.D. +0.2 N.D. -0.6
carbon source L-Histidine (C) -0.2 N.D. +0.2 N.D. -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.4 N.D. -0.3 N.D. +0.3
r2a outgrowth control R2A outgrowth control -0.0 N.D. +0.3 N.D. -0.5
carbon source succinate (C) -0.3 N.D. +0.4 N.D. -0.2
carbon source L-Proline (C) -0.4 N.D. +0.5 N.D. -0.1
carbon source L-tyrosine (C) +0.1 N.D. +0.5 N.D. -0.5
carbon source Formate (C) -0.2 N.D. +0.8 N.D. -0.5
carbon source D-Glucose (C) +0.3 N.D. +0.6 N.D. -0.7
carbon source L-Leucine (C) +0.2 N.D. -0.3 N.D. +0.4
carbon source Ethanol (C) -0.3 N.D. +0.4 N.D. +0.4
carbon source L-Alanine (C) -0.2 N.D. +0.4 N.D. +0.3
carbon source D,L-Malic Acid (C) +0.6 N.D. +0.1 N.D. -0.1
carbon source a-Ketoglutaric (C) -0.1 N.D. +0.9 N.D. -0.0
carbon source Ethanol (C) -0.1 N.D. +0.7 N.D. +0.1
carbon source L-Phenylalanine (C) +0.0 N.D. +0.0 N.D. +0.7
carbon source L-Fucose (C) +0.1 N.D. +0.4 N.D. +0.3
carbon source D-Mannose (C) +0.1 N.D. +0.5 N.D. +0.2
carbon source L-Arabinose (C) +0.3 N.D. +0.6 N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. +0.1 N.D. +0.9
carbon source Adenine (C) +0.2 N.D. +0.2 N.D. +0.4
carbon source propionate (C) +0.4 N.D. +0.7 N.D. -0.2
carbon source L-Fucose (C) +0.2 N.D. +0.8 N.D. +0.2
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ABID97_RS08955
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ABID97_RS08960
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ABID97_RS08970
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ABID97_RS08975
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