Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08945 and ABID97_RS08950 are separated by 144 nucleotidesABID97_RS08950 and ABID97_RS08955 are separated by 43 nucleotidesABID97_RS08955 and ABID97_RS08960 are separated by 129 nucleotidesABID97_RS08960 and ABID97_RS08965 are separated by 128 nucleotides ABID97_RS08945: ABID97_RS08945 - type VI secretion system ATPase TssH, at 1,873,105 to 1,875,819 _RS08945 ABID97_RS08950: ABID97_RS08950 - type VI secretion system contractile sheath small subunit, at 1,875,964 to 1,876,500 _RS08950 ABID97_RS08955: ABID97_RS08955 - type VI secretion system contractile sheath large subunit, at 1,876,544 to 1,878,040 _RS08955 ABID97_RS08960: ABID97_RS08960 - type VI secretion system tube protein Hcp, at 1,878,170 to 1,878,655 _RS08960 ABID97_RS08965: ABID97_RS08965 - type VI secretion system baseplate subunit TssK, at 1,878,784 to 1,880,139 _RS08965
Group Condition ABID97_RS08945 ABID97_RS08950 ABID97_RS08955 ABID97_RS08960 ABID97_RS08965
carbon source L-tyrosine (C) -0.1 -0.0 -0.2 N.D. -1.1
plant outgrowth control Plant outgrowth control -0.1 -0.1 -0.1 N.D. -0.7
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.1 -0.4 N.D. -0.3
control NP -0.2 +0.2 -0.1 N.D. -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.1 +0.1 N.D. +0.1
carbon source L-Histidine (C) +0.4 +0.6 -0.2 N.D. -1.0
plant outgrowth control Plant outgrowth control -0.5 +0.1 -0.1 N.D. +0.4
carbon source a-Ketoglutaric (C) +0.2 +0.5 -0.2 N.D. -0.5
carbon source D-Sorbitol (C) +0.2 +0.4 +0.0 N.D. -0.5
carbon source L-Proline (C) -0.1 +0.3 -0.4 N.D. +0.5
carbon source L-Threonine (C) -0.0 +0.3 -0.2 N.D. +0.4
carbon source 2-Deoxy-D-Ribose (C) +0.5 +0.2 -0.1 N.D. -0.1
carbon source L-Malic (C) +0.4 +0.2 -0.3 N.D. +0.2
carbon source propionate (C) +0.5 -0.2 -0.1 N.D. +0.3
carbon source D-Glucuronic Acid (C) +0.1 -0.2 +0.1 N.D. +0.5
carbon source L-Alanine (C) +0.3 +0.3 -0.3 N.D. +0.3
carbon source Gly-Glu (C) +0.4 +0.1 -0.2 N.D. +0.3
carbon source L-Alanine (C) +0.3 +0.2 -0.2 N.D. +0.4
carbon source butyrate (C) +0.6 +0.4 +0.1 N.D. -0.2
carbon source D,L-Lactate (C) +0.1 +0.4 -0.1 N.D. +0.6
carbon source D-Gluconic Acid (C) -0.1 +0.6 +0.1 N.D. +0.4
carbon source L-tyrosine (C) +0.2 +0.2 +0.1 N.D. +0.5
carbon source Formate (C) +0.2 +0.1 -0.2 N.D. +0.8
carbon source L-Arabinose (C) -0.2 +0.3 +0.3 N.D. +0.6
carbon source Ethanol (C) +0.1 +0.3 -0.1 N.D. +0.7
carbon source a-Ketoglutaric (C) +0.1 +0.2 -0.1 N.D. +0.9
carbon source D,L-Malic Acid (C) +0.4 +0.3 +0.6 N.D. +0.1
carbon source D-Glucose (C) +0.2 +0.5 +0.3 N.D. +0.6
carbon source L-Fucose (C) +0.4 +0.2 +0.2 N.D. +0.8
carbon source propionate (C) +0.6 +0.5 +0.4 N.D. +0.7
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ABID97_RS08945
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ABID97_RS08950
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ABID97_RS08960
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ABID97_RS08965
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