Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08925 and ABID97_RS08930 are separated by 2 nucleotidesABID97_RS08930 and ABID97_RS08935 are separated by 32 nucleotidesABID97_RS08935 and ABID97_RS08940 overlap by 47 nucleotidesABID97_RS08940 and ABID97_RS08945 are separated by 398 nucleotides ABID97_RS08925: ABID97_RS08925 - MarR family transcriptional regulator, at 1,870,782 to 1,871,309 _RS08925 ABID97_RS08930: ABID97_RS08930 - thioesterase family protein, at 1,871,312 to 1,871,776 _RS08930 ABID97_RS08935: ABID97_RS08935 - type VI secretion system lipoprotein TssJ, at 1,871,809 to 1,872,492 _RS08935 ABID97_RS08940: ABID97_RS08940 - hypothetical protein, at 1,872,446 to 1,872,706 _RS08940 ABID97_RS08945: ABID97_RS08945 - type VI secretion system ATPase TssH, at 1,873,105 to 1,875,819 _RS08945
Group Condition ABID97_RS08925 ABID97_RS08930 ABID97_RS08935 ABID97_RS08940 ABID97_RS08945
plant outgrowth control Plant outgrowth control N.D. -0.8 +0.3 N.D. -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.0 +0.2 N.D. -0.8
phage V2_10 N.D. +0.2 -0.3 N.D. -0.4
phage V2_10 N.D. -0.5 +0.2 N.D. -0.3
carbon source D-Arabinose (C) N.D. +0.4 -0.5 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 +0.5 N.D. -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.0 +0.6 N.D. -0.4
carbon source L-Malic (C) N.D. +0.2 -0.3 N.D. +0.4
carbon source Fumarate (C) N.D. +0.4 -0.3 N.D. +0.3
carbon source L-Histidine (C) N.D. +0.5 -0.4 N.D. +0.4
carbon source D-Mannose (C) N.D. +0.6 -0.3 N.D. +0.2
carbon source L-Alanine (C) N.D. +0.6 -0.4 N.D. +0.3
carbon source L-Glutamine (C) N.D. +0.8 -0.1 N.D. -0.1
carbon source L-Fucose (C) N.D. +0.5 -0.3 N.D. +0.4
carbon source Tween 20 (C) N.D. +0.6 -0.2 N.D. +0.2
phage V2_100 N.D. -0.3 +0.6 N.D. +0.4
carbon source a-Ketoglutaric (C) N.D. +0.7 -0.1 N.D. +0.1
carbon source L-Proline (C) N.D. +0.1 +0.7 N.D. -0.1
carbon source L-Arabinose (C) N.D. +0.4 +0.6 N.D. -0.2
carbon source L-Threonine (C) N.D. +0.6 -0.1 N.D. +0.3
carbon source L-Lactate (C) N.D. +0.5 +0.3 N.D. +0.1
carbon source Formate (C) N.D. +0.2 +0.5 N.D. +0.2
carbon source L-Lactate (C) N.D. +0.4 +0.6 N.D. -0.1
carbon source Glycolic Acid (C) N.D. +0.5 +0.2 N.D. +0.2
carbon source Glucuronamide (C) N.D. +0.6 +0.3 N.D. +0.2
carbon source propionate (C) N.D. +0.6 -0.0 N.D. +0.5
carbon source Glucuronamide (C) N.D. +0.5 +0.2 N.D. +0.5
carbon source D-Ribose (C) N.D. +0.6 +0.3 N.D. +0.4
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.4 +0.5 N.D. +0.5
carbon source propionate (C) N.D. +0.6 +0.4 N.D. +0.6
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ABID97_RS08925
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ABID97_RS08930
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ABID97_RS08945
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