Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08885 and ABID97_RS08890 overlap by 4 nucleotidesABID97_RS08890 and ABID97_RS08895 are separated by 40 nucleotidesABID97_RS08895 and ABID97_RS08900 are separated by 43 nucleotidesABID97_RS08900 and ABID97_RS08905 overlap by 4 nucleotides ABID97_RS08885: ABID97_RS08885 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 1,861,624 to 1,862,949 _RS08885 ABID97_RS08890: ABID97_RS08890 - aromatic-ring-hydroxylating dioxygenase subunit beta, at 1,862,946 to 1,863,413 _RS08890 ABID97_RS08895: ABID97_RS08895 - ABC transporter substrate-binding protein, at 1,863,454 to 1,864,617 _RS08895 ABID97_RS08900: ABID97_RS08900 - branched-chain amino acid ABC transporter permease, at 1,864,661 to 1,865,716 _RS08900 ABID97_RS08905: ABID97_RS08905 - branched-chain amino acid ABC transporter ATP-binding protein/permease, at 1,865,713 to 1,867,512 _RS08905
Group Condition ABID97_RS08885 ABID97_RS08890 ABID97_RS08895 ABID97_RS08900 ABID97_RS08905
carbon source L-Histidine (C) -0.9 -0.9 -0.4 +0.4 -0.3
carbon source propionate (C) -0.9 -0.6 +0.4 -0.6 +0.2
carbon source D-Mannose (C) -0.0 -0.6 -0.3 -0.7 +0.3
carbon source propionate (C) -0.2 -0.4 +0.3 -0.8 -0.1
phage V1_10 -0.3 -1.3 +0.5 -0.1 +0.1
carbon source D-Xylose (C) -1.0 +0.1 -0.4 +0.2 +0.1
carbon source L-Leucine (C) -0.5 -0.1 -0.4 +0.5 -0.5
carbon source Fumarate (C) -0.5 -0.6 -0.3 +0.3 +0.2
carbon source D-Galactose (C) -0.3 -0.3 +0.2 +0.2 -0.6
carbon source L-Asparagine (C) -0.5 -0.6 +0.3 +0.3 -0.3
carbon source L-Alanine (C) -1.1 -0.1 -0.2 +0.6 +0.1
carbon source butyrate (C) -0.4 +0.4 +0.1 -0.1 -0.7
carbon source Ethanol (C) -0.3 +0.2 -0.5 +0.7 -0.7
carbon source pyruvate (C) -1.0 +0.3 +0.4 +0.1 -0.0
carbon source L-Histidine (C) -0.5 -0.6 +0.6 +0.4 -0.2
carbon source L-Threonine (C) -0.8 -0.1 +0.1 +0.5 +0.2
carbon source L-Malic (C) -0.6 -0.3 +0.1 +0.4 +0.2
carbon source D-Xylose (C) -0.7 +0.3 -0.2 +0.2 +0.4
carbon source D-Galactose (C) -0.5 -0.2 +0.2 +0.8 -0.2
r2a outgrowth control R2A outgrowth control -0.2 +0.4 +0.6 +0.3 -0.8
phage V2_10 -0.5 +0.4 +0.4 -0.4 +0.5
r2a outgrowth control R2A outgrowth control +0.2 +0.7 -0.2 +0.3 -0.5
carbon source D-Glucuronic Acid (C) +0.2 +0.5 +0.4 +0.3 -0.8
carbon source L-Alanine (C) -0.2 +0.6 +0.2 -0.3 +0.4
phage V2_100 +0.3 -0.4 +0.5 -0.6 +1.1
carbon source L-Arabinose (C) -0.2 -0.2 +0.3 +0.4 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.2 +1.2 -0.3 +0.6
carbon source butyrate (C) +1.0 +0.4 -0.1 -0.2 +0.1
carbon source Glucuronamide (C) +1.0 +0.4 +0.3 -0.1 +0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.3 +0.7 +0.9 +0.6
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