Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08750 and ABID97_RS08755 are separated by 133 nucleotidesABID97_RS08755 and ABID97_RS08760 are separated by 144 nucleotidesABID97_RS08760 and ABID97_RS08765 are separated by 47 nucleotidesABID97_RS08765 and ABID97_RS08770 are separated by 20 nucleotides ABID97_RS08750: ABID97_RS08750 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 1,832,787 to 1,833,533 _RS08750 ABID97_RS08755: ABID97_RS08755 - 50S ribosomal protein L19, at 1,833,667 to 1,834,041 _RS08755 ABID97_RS08760: ABID97_RS08760 - CoA pyrophosphatase, at 1,834,186 to 1,834,905 _RS08760 ABID97_RS08765: ABID97_RS08765 - CobD/CbiB family protein, at 1,834,953 to 1,835,954 _RS08765 ABID97_RS08770: ABID97_RS08770 - histidinol-phosphate transaminase, at 1,835,975 to 1,837,063 _RS08770
Group Condition ABID97_RS08750 ABID97_RS08755 ABID97_RS08760 ABID97_RS08765 ABID97_RS08770
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 +0.3 -2.6 -5.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. -1.0 +0.5 -2.2 -3.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -2.7 +0.6 -1.6 -0.3
carbon source L-Histidine (C) N.D. -1.3 +0.6 -1.8 +0.1
carbon source L-Histidine (C) N.D. -1.0 +0.2 -1.6 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.4 +0.5 -1.0 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.4 +0.7 -1.1 -0.3
phage V2_10 N.D. +0.3 -0.8 -1.1 -0.0
carbon source L-Leucine (C) N.D. +0.4 +0.3 -2.1 -0.0
carbon source L-Leucine (C) N.D. +0.5 +0.4 -2.1 -0.1
phage V1_10 N.D. +0.9 -0.6 -1.5 +0.2
carbon source L-Tryptophan (C) N.D. +1.0 +0.1 -1.4 -0.2
carbon source D-Glucose (C) N.D. +0.2 +0.5 -1.3 +0.2
carbon source L-Proline (C) N.D. +1.0 +0.0 -1.3 -0.0
carbon source Glycolic Acid (C) N.D. +0.0 +1.1 -1.0 +0.1
carbon source Formate (C) N.D. +0.9 +0.3 -0.9 +0.2
phage V2_100 N.D. +1.5 -0.3 -0.4 -0.1
carbon source Formate (C) N.D. +0.6 +0.6 -0.8 +0.4
carbon source L-Phenylalanine (C) N.D. +2.9 +0.1 -2.2 -0.1
carbon source L-Tryptophan (C) N.D. +1.4 +0.2 -0.8 +0.2
carbon source L-Phenylalanine (C) N.D. +3.0 -0.1 -1.9 +0.2
carbon source D-Glucuronic Acid (C) N.D. +1.7 +0.6 -0.9 +0.0
carbon source D,L-Malic Acid (C) N.D. -1.2 +0.5 +2.4 +0.1
carbon source a-Ketoglutaric (C) N.D. +1.1 +0.5 +0.6 +0.0
carbon source L-tyrosine (C) N.D. +2.0 +0.1 +0.3 -0.1
carbon source Ethanol (C) N.D. +1.0 +0.4 +0.8 +0.2
carbon source Glucuronamide (C) N.D. +1.1 +0.4 +1.8 +0.1
carbon source Glucuronamide (C) N.D. +1.5 +0.7 +1.8 +0.0
carbon source butyrate (C) N.D. +2.8 +0.4 +1.2 +0.2
carbon source butyrate (C) N.D. +2.9 +0.7 +1.6 +0.2
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