Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08640 and ABID97_RS08645 are separated by 133 nucleotidesABID97_RS08645 and ABID97_RS08650 are separated by 105 nucleotidesABID97_RS08650 and ABID97_RS08655 are separated by 132 nucleotidesABID97_RS08655 and ABID97_RS08660 overlap by 1 nucleotides ABID97_RS08640: ABID97_RS08640 - DUF3579 domain-containing protein, at 1,815,175 to 1,815,507 _RS08640 ABID97_RS08645: ABID97_RS08645 - 30S ribosomal protein S20, at 1,815,641 to 1,815,955 _RS08645 ABID97_RS08650: ABID97_RS08650 - murein biosynthesis integral membrane protein MurJ, at 1,816,061 to 1,817,614 _RS08650 ABID97_RS08655: ABID97_RS08655 - tetratricopeptide repeat protein, at 1,817,747 to 1,818,598 _RS08655 ABID97_RS08660: ABID97_RS08660 - VOC family protein, at 1,818,598 to 1,819,026 _RS08660
Group Condition ABID97_RS08640 ABID97_RS08645 ABID97_RS08650 ABID97_RS08655 ABID97_RS08660
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 N.D. N.D. -0.1 +0.1
carbon source acetate (C) -2.3 N.D. N.D. +0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.5 N.D. N.D. +0.7 +0.4
carbon source acetate (C) -1.6 N.D. N.D. +0.2 +0.1
carbon source L-Asparagine (C) -0.7 N.D. N.D. +0.2 -0.4
r2a outgrowth control R2A outgrowth control -0.8 N.D. N.D. -0.2 +0.1
plant outgrowth control Plant outgrowth control -1.0 N.D. N.D. +0.1 +0.1
carbon source D-Ribose (C) -1.0 N.D. N.D. +0.2 +0.2
phage V1_1 -0.5 N.D. N.D. -0.2 +0.3
plant outgrowth control Plant outgrowth control -0.7 N.D. N.D. -0.1 +0.6
carbon source D,L-Malic Acid (C) -0.4 N.D. N.D. -0.2 +0.5
carbon source D-Galactose (C) -0.5 N.D. N.D. +0.3 +0.1
carbon source casaminos (C) -0.7 N.D. N.D. +0.4 +0.4
r2a outgrowth control R2A outgrowth control -0.4 N.D. N.D. +0.3 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 N.D. N.D. +0.7 +0.3
carbon source Glucuronamide (C) -0.2 N.D. N.D. +0.3 +0.4
carbon source Glycerol (C) +0.6 N.D. N.D. +0.2 -0.3
carbon source propionate (C) -0.6 N.D. N.D. +1.1 +0.1
carbon source Glycolic Acid (C) -0.3 N.D. N.D. +0.6 +0.3
phage V2_100 -0.2 N.D. N.D. +0.3 +0.5
carbon source propionate (C) +0.2 N.D. N.D. +0.9 -0.4
carbon source butyrate (C) -0.1 N.D. N.D. +0.8 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.8 N.D. N.D. +0.2 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.8 N.D. N.D. -0.1 +0.3
carbon source D-Glucuronic Acid (C) +0.5 N.D. N.D. +0.2 +0.3
carbon source L-Arabinose (C) +0.4 N.D. N.D. +0.4 +0.3
carbon source Adenine (C) +0.1 N.D. N.D. +0.6 +0.3
carbon source D-Sorbitol (C) +0.4 N.D. N.D. +0.5 +0.3
carbon source L-tyrosine (C) +1.1 N.D. N.D. +0.1 +0.2
carbon source L-tyrosine (C) +0.8 N.D. N.D. +0.6 +0.4
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ABID97_RS08640
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