Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS08625 and ABID97_RS08630 are separated by 22 nucleotidesABID97_RS08630 and ABID97_RS08635 overlap by 4 nucleotidesABID97_RS08635 and ABID97_RS08640 are separated by 161 nucleotidesABID97_RS08640 and ABID97_RS08645 are separated by 133 nucleotides ABID97_RS08625: ABID97_RS08625 - S9 family peptidase, at 1,810,898 to 1,812,850 _RS08625 ABID97_RS08630: ABID97_RS08630 - ornithine carbamoyltransferase, at 1,812,873 to 1,813,808 _RS08630 ABID97_RS08635: ABID97_RS08635 - aspartate aminotransferase family protein, at 1,813,805 to 1,815,013 _RS08635 ABID97_RS08640: ABID97_RS08640 - DUF3579 domain-containing protein, at 1,815,175 to 1,815,507 _RS08640 ABID97_RS08645: ABID97_RS08645 - 30S ribosomal protein S20, at 1,815,641 to 1,815,955 _RS08645
Group Condition ABID97_RS08625 ABID97_RS08630 ABID97_RS08635 ABID97_RS08640 ABID97_RS08645
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. N.D. -2.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. N.D. -2.5 N.D.
carbon source acetate (C) -0.0 N.D. N.D. -2.3 N.D.
carbon source acetate (C) +0.0 N.D. N.D. -1.6 N.D.
carbon source D-Ribose (C) -0.0 N.D. N.D. -1.0 N.D.
plant outgrowth control Plant outgrowth control +0.1 N.D. N.D. -1.0 N.D.
carbon source pyruvate (C) -0.0 N.D. N.D. -0.8 N.D.
carbon source casaminos (C) -0.1 N.D. N.D. -0.7 N.D.
carbon source propionate (C) -0.1 N.D. N.D. -0.6 N.D.
r2a outgrowth control R2A outgrowth control +0.1 N.D. N.D. -0.8 N.D.
carbon source L-Asparagine (C) +0.0 N.D. N.D. -0.7 N.D.
plant outgrowth control Plant outgrowth control +0.0 N.D. N.D. -0.7 N.D.
carbon source L-Proline (C) -0.0 N.D. N.D. -0.6 N.D.
carbon source pyruvate (C) +0.1 N.D. N.D. -0.7 N.D.
carbon source Fumarate (C) +0.0 N.D. N.D. -0.6 N.D.
carbon source D-Fructose (C) -0.0 N.D. N.D. -0.6 N.D.
carbon source L-Asparagine (C) +0.1 N.D. N.D. -0.7 N.D.
carbon source D-Fructose (C) +0.1 N.D. N.D. -0.6 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.1 N.D. N.D. -0.5 N.D.
carbon source Fumarate (C) +0.2 N.D. N.D. -0.6 N.D.
phage V1_1 +0.1 N.D. N.D. -0.5 N.D.
carbon source D,L-Malic Acid (C) +0.1 N.D. N.D. -0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 N.D. N.D. -0.6 N.D.
carbon source D,L-Malic Acid (C) +0.2 N.D. N.D. -0.4 N.D.
carbon source L-Alanine (C) +0.4 N.D. N.D. -0.2 N.D.
carbon source Glycerol (C) -0.0 N.D. N.D. +0.6 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.0 N.D. N.D. +0.8 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.1 N.D. N.D. +0.8 N.D.
carbon source L-tyrosine (C) +0.2 N.D. N.D. +0.8 N.D.
carbon source L-tyrosine (C) +0.2 N.D. N.D. +1.1 N.D.
remove
ABID97_RS08625
plot		 remove
ABID97_RS08630
plot		 remove
ABID97_RS08635		 remove
ABID97_RS08640
plot		 remove
ABID97_RS08645
plot