Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08600 and ABID97_RS08605 are separated by 10 nucleotidesABID97_RS08605 and ABID97_RS08610 are separated by 77 nucleotidesABID97_RS08610 and ABID97_RS08615 are separated by 34 nucleotidesABID97_RS08615 and ABID97_RS08620 overlap by 4 nucleotides ABID97_RS08600: ABID97_RS08600 - kynureninase, at 1,806,432 to 1,807,718 _RS08600 ABID97_RS08605: ABID97_RS08605 - arylformamidase, at 1,807,729 to 1,808,379 _RS08605 ABID97_RS08610: ABID97_RS08610 - YkgJ family cysteine cluster protein, at 1,808,457 to 1,808,771 _RS08610 ABID97_RS08615: ABID97_RS08615 - HAMP domain-containing sensor histidine kinase, at 1,808,806 to 1,810,161 _RS08615 ABID97_RS08620: ABID97_RS08620 - response regulator transcription factor, at 1,810,158 to 1,810,814 _RS08620
Group Condition ABID97_RS08600 ABID97_RS08605 ABID97_RS08610 ABID97_RS08615 ABID97_RS08620
carbon source L-Tryptophan (C) -4.9 -7.2 +0.2 +0.0 N.D.
carbon source L-Tryptophan (C) -5.3 -3.9 +0.0 +0.1 N.D.
carbon source L-Alanine (C) -0.2 -0.2 -0.2 -0.7 N.D.
carbon source D,L-Malic Acid (C) +0.0 -0.2 -0.2 -0.8 N.D.
carbon source propionate (C) +0.1 -0.6 -0.2 -0.0 N.D.
carbon source L-Alanine (C) -0.1 -0.1 -0.4 +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.3 -0.5 -0.3 N.D.
carbon source L-Histidine (C) +0.0 +0.3 -0.3 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -0.4 +0.1 -0.1 N.D.
carbon source Tween 20 (C) -0.1 -0.3 -0.2 +0.4 N.D.
carbon source L-Phenylalanine (C) -0.1 +0.4 -0.0 -0.3 N.D.
carbon source L-Phenylalanine (C) -0.1 -0.3 +0.2 +0.2 N.D.
phage V1_10 +0.0 -0.1 -0.4 +0.5 N.D.
carbon source D-Sorbitol (C) +0.0 -0.0 +0.4 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.0 +0.3 -0.3 +0.2 N.D.
carbon source D,L-Lactate (C) -0.0 +0.2 +0.4 -0.3 N.D.
carbon source L-Threonine (C) -0.1 +0.3 +0.3 -0.3 N.D.
carbon source casaminos (C) +0.2 -0.3 +0.1 +0.3 N.D.
r2a outgrowth control R2A outgrowth control +0.2 -0.2 +0.4 +0.1 N.D.
carbon source L-Lactate (C) -0.2 -0.0 +0.4 +0.2 N.D.
carbon source Formate (C) -0.2 +0.2 +0.2 +0.3 N.D.
carbon source Glycolic Acid (C) +0.1 +0.4 -0.2 +0.1 N.D.
carbon source D-Glucuronic Acid (C) -0.2 -0.1 -0.1 +0.8 N.D.
carbon source D-Ribose (C) -0.1 -0.1 +0.4 +0.4 N.D.
carbon source L-tyrosine (C) +0.1 -0.1 +0.6 +0.0 N.D.
plant outgrowth control Plant outgrowth control -0.0 -0.0 +0.2 +0.5 N.D.
carbon source casaminos (C) -0.0 +0.1 +0.3 +0.3 N.D.
carbon source D,L-Malic Acid (C) -0.1 +0.3 +0.2 +0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.3 +0.4 -0.1 N.D.
carbon source D-Galactose (C) +0.1 +0.0 +0.5 +0.2 N.D.
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