Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08570 and ABID97_RS08575 are separated by 28 nucleotidesABID97_RS08575 and ABID97_RS08580 are separated by 5 nucleotidesABID97_RS08580 and ABID97_RS08585 are separated by 13 nucleotidesABID97_RS08585 and ABID97_RS08590 are separated by 58 nucleotides ABID97_RS08570: ABID97_RS08570 - ferrous iron transporter B, at 1,800,356 to 1,802,251 _RS08570 ABID97_RS08575: ABID97_RS08575 - DUF6587 family protein, at 1,802,280 to 1,802,567 _RS08575 ABID97_RS08580: ABID97_RS08580 - FAD-dependent monooxygenase, at 1,802,573 to 1,803,757 _RS08580 ABID97_RS08585: ABID97_RS08585 - SMI1/KNR4 family protein, at 1,803,771 to 1,805,021 _RS08585 ABID97_RS08590: ABID97_RS08590 - tryptophan 2,3-dioxygenase, at 1,805,080 to 1,805,916 _RS08590
Group Condition ABID97_RS08570 ABID97_RS08575 ABID97_RS08580 ABID97_RS08585 ABID97_RS08590
carbon source L-Tryptophan (C) +0.1 N.D. N.D. -0.2 -8.1
carbon source L-Tryptophan (C) +0.3 N.D. N.D. +0.2 -8.0
carbon source D,L-Malic Acid (C) -4.7 N.D. N.D. -0.4 -0.3
carbon source Gly-Glu (C) -4.3 N.D. N.D. -0.2 +0.1
carbon source D-Gluconic Acid (C) -4.0 N.D. N.D. -0.2 -0.1
plant outgrowth control Plant outgrowth control -4.0 N.D. N.D. +0.3 -0.4
plant outgrowth control Plant outgrowth control -3.7 N.D. N.D. -0.0 -0.2
r2a outgrowth control R2A outgrowth control -3.6 N.D. N.D. -0.0 -0.3
r2a outgrowth control R2A outgrowth control -3.6 N.D. N.D. -0.1 -0.2
carbon source L-Histidine (C) -3.4 N.D. N.D. -0.0 -0.3
carbon source Glycolic Acid (C) -4.4 N.D. N.D. +0.2 +0.5
carbon source Gly-Glu (C) -3.8 N.D. N.D. +0.3 +0.2
carbon source Glycolic Acid (C) -3.8 N.D. N.D. +0.2 +0.4
carbon source 4-Hydroxybenzoic Acid (C) -3.1 N.D. N.D. +0.2 -0.0
carbon source D-Glucuronic Acid (C) -2.8 N.D. N.D. -0.3 +0.3
r2a outgrowth control R2A outgrowth control -2.2 N.D. N.D. +0.0 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -1.9 N.D. N.D. -0.2 -0.1
carbon source D-Gluconic Acid (C) -2.2 N.D. N.D. +0.1 +0.2
r2a outgrowth control R2A outgrowth control -2.0 N.D. N.D. -0.1 +0.2
carbon source L-Histidine (C) -2.1 N.D. N.D. +0.1 +0.3
phage V2_100 -0.5 N.D. N.D. -0.1 -0.8
carbon source casaminos (C) -1.4 N.D. N.D. -0.2 +0.3
carbon source D-Arabinose (C) -1.4 N.D. N.D. -0.1 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 N.D. N.D. +0.1 +0.2
carbon source D-Serine (C) +1.2 N.D. N.D. -0.1 -0.4
carbon source Glucuronamide (C) +1.3 N.D. N.D. -0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. N.D. +0.2 +1.4
carbon source D-Serine (C) +1.2 N.D. N.D. -0.1 +0.3
carbon source D,L-Malic Acid (C) +1.1 N.D. N.D. +0.2 +0.2
carbon source Glucuronamide (C) +1.1 N.D. N.D. +0.1 +0.4
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