Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08500 and ABID97_RS08505 are separated by 13 nucleotidesABID97_RS08505 and ABID97_RS08510 are separated by 226 nucleotidesABID97_RS08510 and ABID97_RS08515 are separated by 184 nucleotidesABID97_RS08515 and ABID97_RS08520 are separated by 13 nucleotides ABID97_RS08500: ABID97_RS08500 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 1,785,730 to 1,786,095 _RS08500 ABID97_RS08505: ABID97_RS08505 - succinate dehydrogenase, cytochrome b556 subunit, at 1,786,109 to 1,786,555 _RS08505 ABID97_RS08510: ABID97_RS08510 - GntR family transcriptional regulator, at 1,786,782 to 1,787,540 _RS08510 ABID97_RS08515: ABID97_RS08515 - malate dehydrogenase, at 1,787,725 to 1,788,711 _RS08515 ABID97_RS08520: ABID97_RS08520 - trans-aconitate 2-methyltransferase, at 1,788,725 to 1,789,506 _RS08520
Group Condition ABID97_RS08500 ABID97_RS08505 ABID97_RS08510 ABID97_RS08515 ABID97_RS08520
carbon source acetate (C) N.D. N.D. -0.5 N.D. -1.4
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -1.6 N.D. -0.2
carbon source Glycerol (C) N.D. N.D. -1.5 N.D. -0.3
carbon source Glycerol (C) N.D. N.D. -1.2 N.D. -0.4
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -1.4 N.D. -0.0
carbon source L-tyrosine (C) N.D. N.D. -1.3 N.D. -0.1
carbon source L-Histidine (C) N.D. N.D. -0.7 N.D. -0.7
carbon source pyruvate (C) N.D. N.D. -0.4 N.D. -0.9
carbon source propionate (C) N.D. N.D. -0.8 N.D. -0.5
carbon source acetate (C) N.D. N.D. -0.2 N.D. -1.1
carbon source propionate (C) N.D. N.D. -1.2 N.D. -0.0
carbon source D-Glucose (C) N.D. N.D. -1.0 N.D. -0.2
carbon source Tween 20 (C) N.D. N.D. -0.7 N.D. -0.5
carbon source L-Phenylalanine (C) N.D. N.D. -0.9 N.D. -0.3
carbon source D-Glucose (C) N.D. N.D. -1.0 N.D. -0.2
carbon source D-Xylose (C) N.D. N.D. -0.7 N.D. -0.3
carbon source pyruvate (C) N.D. N.D. -0.2 N.D. -0.7
carbon source L-Asparagine (C) N.D. N.D. -0.4 N.D. -0.5
carbon source L-Phenylalanine (C) N.D. N.D. -0.9 N.D. -0.1
carbon source D-Mannose (C) N.D. N.D. -0.5 N.D. -0.4
carbon source D-Fructose (C) N.D. N.D. -0.3 N.D. -0.5
r2a outgrowth control R2A outgrowth control N.D. N.D. -0.5 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.3 N.D. -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.1 N.D. -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 N.D. -1.0
carbon source casaminos (C) N.D. N.D. -0.6 N.D. -0.3
carbon source L-Histidine (C) N.D. N.D. -0.3 N.D. -0.5
carbon source succinate (C) N.D. N.D. -0.7 N.D. -0.1
carbon source butyrate (C) N.D. N.D. +6.0 N.D. +4.6
carbon source butyrate (C) N.D. N.D. +6.6 N.D. +5.0
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