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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS08490 and ABID97_RS08495 are separated by 27 nucleotides
ABID97_RS08495 and ABID97_RS08500 are separated by 13 nucleotides
ABID97_RS08500 and ABID97_RS08505 are separated by 13 nucleotides
ABID97_RS08505 and ABID97_RS08510 are separated by 226 nucleotides
ABID97_RS08490: ABID97_RS08490 - succinate dehydrogenase iron-sulfur subunit, at 1,783,179 to 1,783,880
_RS08490
ABID97_RS08495: ABID97_RS08495 - succinate dehydrogenase flavoprotein subunit, at 1,783,908 to 1,785,716
_RS08495
ABID97_RS08500: ABID97_RS08500 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 1,785,730 to 1,786,095
_RS08500
ABID97_RS08505: ABID97_RS08505 - succinate dehydrogenase, cytochrome b556 subunit, at 1,786,109 to 1,786,555
_RS08505
ABID97_RS08510: ABID97_RS08510 - GntR family transcriptional regulator, at 1,786,782 to 1,787,540
_RS08510
Group
Condition
ABID97
_RS08490
ABID97
_RS08495
ABID97
_RS08500
ABID97
_RS08505
ABID97
_RS08510
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
N.D.
N.D.
-1.6
carbon source
Glycerol (C)
N.D.
N.D.
N.D.
N.D.
-1.5
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
N.D.
N.D.
-1.4
carbon source
L-tyrosine (C)
N.D.
N.D.
N.D.
N.D.
-1.3
carbon source
propionate (C)
N.D.
N.D.
N.D.
N.D.
-1.2
carbon source
Glycerol (C)
N.D.
N.D.
N.D.
N.D.
-1.2
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
N.D.
-1.0
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
N.D.
-1.0
carbon source
L-Phenylalanine (C)
N.D.
N.D.
N.D.
N.D.
-0.9
carbon source
L-Phenylalanine (C)
N.D.
N.D.
N.D.
N.D.
-0.9
carbon source
propionate (C)
N.D.
N.D.
N.D.
N.D.
-0.8
carbon source
succinate (C)
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
D-Xylose (C)
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
Tween 20 (C)
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
L-Histidine (C)
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
Tween 20 (C)
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
D-Glucuronic Acid (C)
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
D,L-Malic Acid (C)
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
casaminos (C)
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
succinate (C)
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
D-Xylose (C)
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
Glycolic Acid (C)
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
L-Glutamine (C)
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
D-Mannose (C)
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
L-Tryptophan (C)
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
Ethanol (C)
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
N.D.
N.D.
N.D.
+0.7
carbon source
butyrate (C)
N.D.
N.D.
N.D.
N.D.
+6.0
carbon source
butyrate (C)
N.D.
N.D.
N.D.
N.D.
+6.6
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