Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08465 and ABID97_RS08470 are separated by 43 nucleotidesABID97_RS08470 and ABID97_RS08475 are separated by 269 nucleotidesABID97_RS08475 and ABID97_RS08480 are separated by 146 nucleotidesABID97_RS08480 and ABID97_RS08485 are separated by 24 nucleotides ABID97_RS08465: ABID97_RS08465 - 3-isopropylmalate dehydratase large subunit, at 1,778,527 to 1,779,948 _RS08465 ABID97_RS08470: ABID97_RS08470 - LysR substrate-binding domain-containing protein, at 1,779,992 to 1,780,945 _RS08470 ABID97_RS08475: ABID97_RS08475 - entericidin A/B family lipoprotein, at 1,781,215 to 1,781,355 _RS08475 ABID97_RS08480: ABID97_RS08480 - citrate synthase, at 1,781,502 to 1,782,812 _RS08480 ABID97_RS08485: ABID97_RS08485 - succinate dehydrogenase assembly factor 2, at 1,782,837 to 1,783,160 _RS08485
Group Condition ABID97_RS08465 ABID97_RS08470 ABID97_RS08475 ABID97_RS08480 ABID97_RS08485
phage V2_1 N.D. +0.0 N.D. -3.5 N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.1 N.D. -2.9 N.D.
plant outgrowth control Plant outgrowth control N.D. +0.1 N.D. -2.8 N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.0 N.D. -2.8 N.D.
phage V1_1 N.D. +0.0 N.D. -2.7 N.D.
control NP N.D. -0.2 N.D. -2.5 N.D.
carbon source succinate (C) N.D. -0.3 N.D. -2.2 N.D.
carbon source Adenine (C) N.D. +0.0 N.D. -2.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 N.D. -2.3 N.D.
carbon source D-Lactate (C) N.D. -0.4 N.D. -2.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 N.D. -2.3 N.D.
carbon source Fumarate (C) N.D. -0.2 N.D. -2.1 N.D.
plant outgrowth control Plant outgrowth control N.D. +0.2 N.D. -2.5 N.D.
carbon source L-Malic (C) N.D. -0.1 N.D. -2.2 N.D.
carbon source succinate (C) N.D. -0.1 N.D. -2.1 N.D.
carbon source pyruvate (C) N.D. -0.1 N.D. -2.1 N.D.
carbon source D-Galactose (C) N.D. -0.2 N.D. -2.1 N.D.
carbon source pyruvate (C) N.D. -0.1 N.D. -2.1 N.D.
carbon source D-Galactose (C) N.D. -0.1 N.D. -2.1 N.D.
carbon source Fumarate (C) N.D. -0.1 N.D. -2.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.0 N.D. -2.2 N.D.
carbon source D,L-Lactate (C) N.D. +0.1 N.D. -2.2 N.D.
carbon source D-Fructose (C) N.D. +0.2 N.D. -2.1 N.D.
carbon source D-Serine (C) N.D. +0.2 N.D. -2.0 N.D.
carbon source L-Threonine (C) N.D. +0.2 N.D. -2.1 N.D.
carbon source Ethanol (C) N.D. +0.2 N.D. -2.0 N.D.
carbon source D,L-Malic Acid (C) N.D. +0.3 N.D. -2.0 N.D.
carbon source D-Ribose (C) N.D. +0.3 N.D. -2.0 N.D.
carbon source D-Glucose (C) N.D. +0.3 N.D. -1.9 N.D.
phage V2_100 N.D. -0.1 N.D. +3.2 N.D.
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