Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS08460 and ABID97_RS08465 are separated by 14 nucleotidesABID97_RS08465 and ABID97_RS08470 are separated by 43 nucleotidesABID97_RS08470 and ABID97_RS08475 are separated by 269 nucleotidesABID97_RS08475 and ABID97_RS08480 are separated by 146 nucleotides ABID97_RS08460: ABID97_RS08460 - 3-isopropylmalate dehydratase small subunit, at 1,777,862 to 1,778,512 _RS08460 ABID97_RS08465: ABID97_RS08465 - 3-isopropylmalate dehydratase large subunit, at 1,778,527 to 1,779,948 _RS08465 ABID97_RS08470: ABID97_RS08470 - LysR substrate-binding domain-containing protein, at 1,779,992 to 1,780,945 _RS08470 ABID97_RS08475: ABID97_RS08475 - entericidin A/B family lipoprotein, at 1,781,215 to 1,781,355 _RS08475 ABID97_RS08480: ABID97_RS08480 - citrate synthase, at 1,781,502 to 1,782,812 _RS08480
Group Condition ABID97_RS08460 ABID97_RS08465 ABID97_RS08470 ABID97_RS08475 ABID97_RS08480
phage V2_1 N.D. N.D. +0.0 N.D. -3.5
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.1 N.D. -2.9
plant outgrowth control Plant outgrowth control N.D. N.D. +0.1 N.D. -2.8
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.0 N.D. -2.8
phage V1_1 N.D. N.D. +0.0 N.D. -2.7
control NP N.D. N.D. -0.2 N.D. -2.5
carbon source succinate (C) N.D. N.D. -0.3 N.D. -2.2
carbon source Adenine (C) N.D. N.D. +0.0 N.D. -2.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.2 N.D. -2.3
carbon source D-Lactate (C) N.D. N.D. -0.4 N.D. -2.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.2 N.D. -2.3
carbon source Fumarate (C) N.D. N.D. -0.2 N.D. -2.1
plant outgrowth control Plant outgrowth control N.D. N.D. +0.2 N.D. -2.5
carbon source L-Malic (C) N.D. N.D. -0.1 N.D. -2.2
carbon source succinate (C) N.D. N.D. -0.1 N.D. -2.1
carbon source pyruvate (C) N.D. N.D. -0.1 N.D. -2.1
carbon source D-Galactose (C) N.D. N.D. -0.2 N.D. -2.1
carbon source pyruvate (C) N.D. N.D. -0.1 N.D. -2.1
carbon source D-Galactose (C) N.D. N.D. -0.1 N.D. -2.1
carbon source Fumarate (C) N.D. N.D. -0.1 N.D. -2.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.0 N.D. -2.2
carbon source D,L-Lactate (C) N.D. N.D. +0.1 N.D. -2.2
carbon source D-Fructose (C) N.D. N.D. +0.2 N.D. -2.1
carbon source D-Serine (C) N.D. N.D. +0.2 N.D. -2.0
carbon source L-Threonine (C) N.D. N.D. +0.2 N.D. -2.1
carbon source Ethanol (C) N.D. N.D. +0.2 N.D. -2.0
carbon source D,L-Malic Acid (C) N.D. N.D. +0.3 N.D. -2.0
carbon source D-Ribose (C) N.D. N.D. +0.3 N.D. -2.0
carbon source D-Glucose (C) N.D. N.D. +0.3 N.D. -1.9
phage V2_100 N.D. N.D. -0.1 N.D. +3.2
remove
ABID97_RS08460
plot		 remove
ABID97_RS08465
plot		 remove
ABID97_RS08470		 remove
ABID97_RS08475
plot		 remove
ABID97_RS08480
plot