Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08410 and ABID97_RS08415 are separated by 49 nucleotidesABID97_RS08415 and ABID97_RS08420 are separated by 22 nucleotidesABID97_RS08420 and ABID97_RS08425 are separated by 66 nucleotidesABID97_RS08425 and ABID97_RS08430 overlap by 1 nucleotides ABID97_RS08410: ABID97_RS08410 - LON peptidase substrate-binding domain-containing protein, at 1,766,602 to 1,767,249 _RS08410 ABID97_RS08415: ABID97_RS08415 - YggT family protein, at 1,767,299 to 1,767,856 _RS08415 ABID97_RS08420: ABID97_RS08420 - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 1,767,879 to 1,768,751 _RS08420 ABID97_RS08425: ABID97_RS08425 - tryptophan synthase subunit alpha, at 1,768,818 to 1,769,663 _RS08425 ABID97_RS08430: ABID97_RS08430 - tryptophan synthase subunit beta, at 1,769,663 to 1,770,937 _RS08430
Group Condition ABID97_RS08410 ABID97_RS08415 ABID97_RS08420 ABID97_RS08425 ABID97_RS08430
carbon source casaminos (C) -0.1 +0.5 N.D. -4.9 -2.6
carbon source L-Proline (C) -0.3 +0.0 N.D. -4.8 -2.0
control NP +0.1 -0.1 N.D. -3.4 -3.6
carbon source Gly-Glu (C) -0.1 +0.1 N.D. -4.9 -2.0
carbon source D-Glucose (C) -0.2 +0.1 N.D. -4.9 -1.9
phage V2_1 -0.1 -0.0 N.D. -3.8 -2.9
carbon source D-Gluconic Acid (C) +0.1 +0.2 N.D. -4.9 -2.0
carbon source succinate (C) -0.2 +0.4 N.D. -5.0 -1.9
carbon source pyruvate (C) -0.1 +0.1 N.D. -4.9 -1.8
carbon source casaminos (C) +0.1 +0.4 N.D. -4.7 -2.4
carbon source 4-Hydroxybenzoic Acid (C) -0.2 +0.3 N.D. -4.7 -1.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.3 N.D. -4.8 -1.6
carbon source Glycolic Acid (C) -0.0 +0.3 N.D. -4.8 -2.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.2 N.D. -4.8 -1.6
carbon source D-Galactose (C) +0.3 +0.3 N.D. -4.9 -2.0
carbon source D,L-Malic Acid (C) +0.3 +0.2 N.D. -4.8 -2.0
carbon source L-Malic (C) +0.1 +0.3 N.D. -5.0 -1.6
plant outgrowth control Plant outgrowth control +0.2 +0.4 N.D. -4.9 -1.8
carbon source Glycerol (C) +0.1 +0.3 N.D. -4.5 -1.9
carbon source D-Gluconic Acid (C) +0.2 +0.4 N.D. -4.8 -1.9
carbon source D-Mannose (C) +0.3 +0.5 N.D. -4.4 -2.4
carbon source L-Lactate (C) +0.1 +0.3 N.D. -4.4 -2.0
carbon source Glycerol (C) +0.2 +0.5 N.D. -4.9 -1.8
carbon source Tween 20 (C) +0.2 +0.6 N.D. -4.8 -2.0
carbon source D-Fructose (C) +0.1 +0.3 N.D. -4.8 -1.5
carbon source D,L-Lactate (C) +0.0 +0.4 N.D. -4.9 -1.4
carbon source L-Lactate (C) +0.3 +0.6 N.D. -4.8 -1.9
carbon source L-Glutamic (C) +0.0 +0.4 N.D. -4.2 -2.0
carbon source L-Threonine (C) -0.3 +0.6 N.D. -4.1 -1.9
carbon source L-Glutamine (C) +0.3 +0.5 N.D. -4.5 -1.7
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ABID97_RS08410
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ABID97_RS08430
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