Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08390 and ABID97_RS08395 are separated by 7 nucleotidesABID97_RS08395 and ABID97_RS08400 overlap by 4 nucleotidesABID97_RS08400 and ABID97_RS08405 are separated by 2 nucleotidesABID97_RS08405 and ABID97_RS08410 are separated by 121 nucleotides ABID97_RS08390: ABID97_RS08390 - beta-N-acetylhexosaminidase, at 1,762,000 to 1,763,106 _RS08390 ABID97_RS08395: ABID97_RS08395 - M48 family metallopeptidase, at 1,763,114 to 1,763,656 _RS08395 ABID97_RS08400: ABID97_RS08400 - Hsp70 family protein, at 1,763,653 to 1,764,915 _RS08400 ABID97_RS08405: ABID97_RS08405 - lysine--tRNA ligase, at 1,764,918 to 1,766,480 _RS08405 ABID97_RS08410: ABID97_RS08410 - LON peptidase substrate-binding domain-containing protein, at 1,766,602 to 1,767,249 _RS08410
Group Condition ABID97_RS08390 ABID97_RS08395 ABID97_RS08400 ABID97_RS08405 ABID97_RS08410
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 +0.2 -0.1 N.D. -0.1
carbon source D-Arabinose (C) -1.7 -0.2 +0.0 N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -0.3 +0.1 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 +0.1 -0.1 N.D. +0.2
carbon source D-Xylose (C) -1.2 +0.1 -0.0 N.D. -0.2
plant outgrowth control Plant outgrowth control -1.1 -0.4 -0.0 N.D. +0.2
carbon source L-Alanine (C) -0.9 +0.1 -0.2 N.D. -0.2
carbon source Glycerol (C) -1.2 -0.1 +0.1 N.D. +0.1
plant outgrowth control Plant outgrowth control -1.2 +0.0 -0.2 N.D. +0.2
carbon source L-Proline (C) -0.8 +0.0 +0.1 N.D. -0.3
carbon source Glucuronamide (C) -0.8 -0.3 +0.0 N.D. +0.1
carbon source D-Glucuronic Acid (C) -1.1 -0.0 +0.2 N.D. +0.1
carbon source Glucuronamide (C) -0.9 -0.1 +0.2 N.D. -0.0
carbon source L-Alanine (C) -1.0 +0.2 -0.0 N.D. +0.0
carbon source D-Xylose (C) -1.2 +0.3 +0.2 N.D. -0.0
r2a outgrowth control R2A outgrowth control -0.4 -0.4 -0.3 N.D. +0.4
carbon source propionate (C) -0.8 +0.2 -0.1 N.D. +0.1
carbon source acetate (C) -0.9 +0.0 +0.1 N.D. +0.2
carbon source D-Gluconic Acid (C) -0.8 +0.1 -0.0 N.D. +0.2
carbon source Glycerol (C) -1.0 +0.3 +0.0 N.D. +0.2
carbon source L-Histidine (C) -1.1 +0.2 +0.1 N.D. +0.3
carbon source L-Phenylalanine (C) -0.6 +0.2 +0.2 N.D. -0.2
carbon source D-Arabinose (C) -1.0 +0.1 +0.2 N.D. +0.3
carbon source D-Mannose (C) -0.8 +0.1 +0.2 N.D. +0.3
carbon source L-Histidine (C) -0.8 +0.4 +0.0 N.D. +0.2
phage V2_100 +0.3 -0.1 +0.2 N.D. -0.7
carbon source casaminos (C) -0.7 +0.3 +0.1 N.D. +0.1
carbon source Glycolic Acid (C) -0.7 +0.3 +0.3 N.D. -0.0
carbon source butyrate (C) -0.6 +0.1 +0.2 N.D. +0.4
phage V1_10 +0.4 +0.3 +0.2 N.D. -0.2
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