Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS08320 and ABID97_RS08325 are separated by 31 nucleotidesABID97_RS08325 and ABID97_RS08330 are separated by 9 nucleotidesABID97_RS08330 and ABID97_RS08335 are separated by 17 nucleotidesABID97_RS08335 and ABID97_RS08340 are separated by 21 nucleotides ABID97_RS08320: ABID97_RS08320 - beta-ketoacyl-ACP synthase II, at 1,748,879 to 1,750,123 _RS08320 ABID97_RS08325: ABID97_RS08325 - hypothetical protein, at 1,750,155 to 1,750,619 _RS08325 ABID97_RS08330: ABID97_RS08330 - RNA polymerase sigma factor RpoE, at 1,750,629 to 1,751,303 _RS08330 ABID97_RS08335: ABID97_RS08335 - sigma-E factor negative regulatory protein, at 1,751,321 to 1,751,986 _RS08335 ABID97_RS08340: ABID97_RS08340 - MucB/RseB C-terminal domain-containing protein, at 1,752,008 to 1,753,075 _RS08340
Group Condition ABID97_RS08320 ABID97_RS08325 ABID97_RS08330 ABID97_RS08335 ABID97_RS08340
carbon source D,L-Malic Acid (C) N.D. -0.2 -3.3 N.D. -1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.0 -1.8 N.D. -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.0 -1.5 N.D. -0.6
carbon source Glycolic Acid (C) N.D. +0.0 -0.7 N.D. -1.3
carbon source L-Alanine (C) N.D. -0.1 -0.6 N.D. -1.1
carbon source butyrate (C) N.D. -0.3 -0.4 N.D. -0.8
carbon source D-Xylose (C) N.D. +0.0 -0.5 N.D. -1.1
carbon source D-Mannose (C) N.D. -0.1 -0.5 N.D. -0.8
carbon source Glycolic Acid (C) N.D. +0.0 -0.5 N.D. -1.0
carbon source D-Glucose (C) N.D. +0.1 -0.4 N.D. -1.0
carbon source Tween 20 (C) N.D. -0.3 -1.1 N.D. +0.3
carbon source D-Xylose (C) N.D. +0.2 -0.3 N.D. -1.0
plant outgrowth control Plant outgrowth control N.D. +0.3 -1.2 N.D. -0.1
carbon source L-Malic (C) N.D. -0.2 -1.6 N.D. +1.2
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.3 -0.8 N.D. +0.6
carbon source L-Arabinose (C) N.D. -0.2 -0.8 N.D. +0.6
carbon source Adenine (C) N.D. -0.1 -0.9 N.D. +0.6
carbon source Adenine (C) N.D. -0.3 -0.8 N.D. +0.8
carbon source L-Malic (C) N.D. -0.2 -1.4 N.D. +1.5
carbon source L-tyrosine (C) N.D. +0.1 -0.8 N.D. +0.7
carbon source Glucuronamide (C) N.D. -0.5 -0.6 N.D. +1.1
carbon source L-tyrosine (C) N.D. -0.1 -0.5 N.D. +0.9
carbon source succinate (C) N.D. -0.0 -0.7 N.D. +1.0
carbon source Glucuronamide (C) N.D. -0.0 -0.7 N.D. +0.9
carbon source D-Serine (C) N.D. +0.1 -0.6 N.D. +0.8
carbon source L-Glutamine (C) N.D. -0.0 -0.6 N.D. +0.9
carbon source L-Glutamine (C) N.D. -0.0 -0.5 N.D. +0.9
carbon source D,L-Malic Acid (C) N.D. +0.4 -0.7 N.D. +1.1
carbon source L-Phenylalanine (C) N.D. -0.2 -1.2 N.D. +2.2
carbon source L-Phenylalanine (C) N.D. -0.1 -1.1 N.D. +2.2
remove
ABID97_RS08320
plot		 remove
ABID97_RS08325
plot		 remove
ABID97_RS08330		 remove
ABID97_RS08335
plot		 remove
ABID97_RS08340
plot