Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS08235 and ABID97_RS08240 are separated by 63 nucleotidesABID97_RS08240 and ABID97_RS08245 are separated by 132 nucleotidesABID97_RS08245 and ABID97_RS08250 are separated by 557 nucleotidesABID97_RS08250 and ABID97_RS08255 overlap by 8 nucleotides ABID97_RS08235: ABID97_RS08235 - uroporphyrinogen-III C-methyltransferase, at 1,731,454 to 1,732,545 _RS08235 ABID97_RS08240: ABID97_RS08240 - heme biosynthesis HemY N-terminal domain-containing protein, at 1,732,609 to 1,733,892 _RS08240 ABID97_RS08245: ABID97_RS08245 - Rne/Rng family ribonuclease, at 1,734,025 to 1,737,297 _RS08245 ABID97_RS08250: ABID97_RS08250 - RluA family pseudouridine synthase, at 1,737,855 to 1,738,967 _RS08250 ABID97_RS08255: ABID97_RS08255 - HAD-IA family hydrolase, at 1,738,960 to 1,739,631 _RS08255
Group Condition ABID97_RS08235 ABID97_RS08240 ABID97_RS08245 ABID97_RS08250 ABID97_RS08255
carbon source L-Histidine (C) N.D. -3.1 +0.5 -3.6 +0.1
carbon source Gly-Glu (C) N.D. -2.7 -0.9 -0.7 +0.2
carbon source L-Histidine (C) N.D. -1.4 +0.1 -3.0 +0.2
carbon source casaminos (C) N.D. -1.4 -0.9 -1.2 +0.1
carbon source L-Leucine (C) N.D. -3.0 +0.4 -0.5 +0.2
carbon source D-Mannose (C) N.D. -2.0 -0.1 -0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.3 -1.3 -1.1 +0.1
carbon source succinate (C) N.D. -1.4 -0.5 -0.9 +0.3
carbon source L-Proline (C) N.D. -1.7 -0.1 -0.7 +0.1
carbon source D-Gluconic Acid (C) N.D. -2.7 +0.0 -0.2 +0.6
carbon source L-Phenylalanine (C) N.D. -2.2 +1.2 -0.8 -0.6
carbon source L-Leucine (C) N.D. -2.2 +0.6 -0.7 +0.1
carbon source D-Glucose (C) N.D. -2.5 +0.2 -0.3 +0.4
carbon source Gly-Glu (C) N.D. -1.4 +0.1 -0.7 +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. -3.3 +2.3 -0.8 +0.1
carbon source Glycerol (C) N.D. -2.0 +0.5 -0.4 +0.3
carbon source L-Phenylalanine (C) N.D. -1.4 +1.3 -0.5 -0.4
carbon source L-Tryptophan (C) N.D. -1.1 +0.5 -0.8 +0.3
carbon source L-Glutamine (C) N.D. +1.1 -0.2 -1.2 -0.2
carbon source Fumarate (C) N.D. +1.1 -0.5 -0.9 +0.1
carbon source L-Alanine (C) N.D. +1.6 -0.5 -0.8 +0.2
carbon source propionate (C) N.D. +1.9 -0.2 -1.0 -0.2
carbon source D-Arabinose (C) N.D. +0.9 +0.6 -1.0 +0.2
carbon source propionate (C) N.D. +1.1 +0.7 -0.6 -0.2
carbon source butyrate (C) N.D. +1.8 -0.2 -0.8 +0.2
carbon source Glucuronamide (C) N.D. +1.5 -0.1 -0.7 +0.3
carbon source butyrate (C) N.D. +2.3 -0.3 -0.8 -0.0
carbon source Glucuronamide (C) N.D. +1.9 +0.4 -0.7 +0.2
carbon source D,L-Malic Acid (C) N.D. +2.6 +0.8 -0.8 -0.1
phage V2_100 N.D. +0.0 +2.7 +0.7 +0.3
remove
ABID97_RS08235
plot		 remove
ABID97_RS08240
plot		 remove
ABID97_RS08245		 remove
ABID97_RS08250
plot		 remove
ABID97_RS08255
plot