Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08155 and ABID97_RS08160 are separated by 38 nucleotidesABID97_RS08160 and ABID97_RS08165 are separated by 22 nucleotidesABID97_RS08165 and ABID97_RS08170 are separated by 201 nucleotidesABID97_RS08170 and ABID97_RS08175 are separated by 98 nucleotides ABID97_RS08155: ABID97_RS08155 - SGNH/GDSL hydrolase family protein, at 1,713,867 to 1,714,667 _RS08155 ABID97_RS08160: ABID97_RS08160 - anti-sigma factor, at 1,714,706 to 1,715,455 _RS08160 ABID97_RS08165: ABID97_RS08165 - sigma-70 family RNA polymerase sigma factor, at 1,715,478 to 1,716,053 _RS08165 ABID97_RS08170: ABID97_RS08170 - DUF3455 domain-containing protein, at 1,716,255 to 1,716,800 _RS08170 ABID97_RS08175: ABID97_RS08175 - hypothetical protein, at 1,716,899 to 1,717,435 _RS08175
Group Condition ABID97_RS08155 ABID97_RS08160 ABID97_RS08165 ABID97_RS08170 ABID97_RS08175
phage V1_10 -0.6 -1.3 +0.2 -0.1 -0.1
control NP -0.1 -1.2 +0.4 +0.1 -0.1
phage V2_100 -0.4 +1.0 -0.7 -0.3 -0.5
carbon source L-Glutamic (C) +0.4 -0.1 -0.4 +0.2 -0.4
carbon source L-Alanine (C) +0.6 -0.7 +0.1 -0.1 -0.1
carbon source Formate (C) +0.4 -0.8 +0.3 +0.4 -0.3
carbon source D-Serine (C) +0.4 -0.7 +0.5 -0.0 -0.1
carbon source Formate (C) +0.6 -0.7 +0.3 +0.1 +0.1
carbon source L-Histidine (C) +1.2 +0.1 -0.7 -0.1 -0.0
carbon source Glucuronamide (C) +0.8 -0.7 +0.2 -0.1 +0.1
carbon source butyrate (C) +0.6 +0.6 -0.0 -0.2 -0.3
plant outgrowth control Plant outgrowth control -0.6 +0.7 +0.3 +0.2 +0.0
carbon source D-Ribose (C) +0.7 -0.6 +0.2 +0.3 +0.1
carbon source Ethanol (C) +0.6 +0.5 -0.5 +0.2 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.9 +0.2 -0.5 +0.2 -0.1
carbon source L-tyrosine (C) +0.9 +0.8 -0.6 -0.0 -0.3
carbon source D-Glucuronic Acid (C) +0.8 +0.5 -0.1 -0.0 -0.2
carbon source L-tyrosine (C) +0.8 -0.3 +0.4 +0.2 -0.1
carbon source Ethanol (C) +0.9 +0.2 -0.0 +0.2 -0.2
carbon source D-Galactose (C) +0.4 +0.8 +0.1 +0.1 -0.2
carbon source Glycerol (C) +0.7 +0.3 +0.2 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.7 +0.7 +0.2 -0.0
carbon source Tween 20 (C) +0.7 +0.6 -0.1 +0.2 +0.2
carbon source D-Fructose (C) +0.8 +0.5 +0.3 +0.1 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.3 -0.0 +0.2 -0.1
carbon source Tween 20 (C) +1.0 +0.5 +0.2 +0.0 +0.1
carbon source pyruvate (C) +0.6 +0.8 +0.3 +0.1 +0.1
carbon source D-Fructose (C) +0.6 +0.8 +0.4 +0.1 -0.0
carbon source D-Ribose (C) +0.5 +1.0 +0.3 +0.3 -0.1
carbon source L-Histidine (C) +1.0 +0.9 +0.4 +0.0 -0.2
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ABID97_RS08155
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ABID97_RS08160
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ABID97_RS08170
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ABID97_RS08175
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