Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS08025 and ABID97_RS08030 are separated by 82 nucleotidesABID97_RS08030 and ABID97_RS08035 are separated by 28 nucleotidesABID97_RS08035 and ABID97_RS08040 are separated by 209 nucleotidesABID97_RS08040 and ABID97_RS08045 are separated by 27 nucleotides ABID97_RS08025: ABID97_RS08025 - nuclear transport factor 2 family protein, at 1,686,679 to 1,687,101 _RS08025 ABID97_RS08030: ABID97_RS08030 - cyanase, at 1,687,184 to 1,687,627 _RS08030 ABID97_RS08035: ABID97_RS08035 - SDR family oxidoreductase, at 1,687,656 to 1,688,408 _RS08035 ABID97_RS08040: ABID97_RS08040 - DUF4329 domain-containing protein, at 1,688,618 to 1,689,136 _RS08040 ABID97_RS08045: ABID97_RS08045 - NAD(P)H-dependent oxidoreductase, at 1,689,164 to 1,689,754 _RS08045
Group Condition ABID97_RS08025 ABID97_RS08030 ABID97_RS08035 ABID97_RS08040 ABID97_RS08045
phage V1_1 +0.4 -0.1 -1.2 -0.2 -0.2
phage V1_10 +0.2 -0.2 -0.2 -0.5 -0.2
carbon source L-Glutamine (C) +0.2 -0.4 -0.4 -0.3 -0.0
carbon source D,L-Malic Acid (C) -0.2 -0.5 -0.4 +0.2 +0.2
carbon source D-Sorbitol (C) +0.5 -0.1 -0.5 -0.3 +0.0
carbon source Ethanol (C) +0.2 -0.4 +0.1 -0.5 +0.1
carbon source L-Malic (C) +0.8 -0.3 -0.6 -0.3 +0.1
r2a outgrowth control R2A outgrowth control +0.3 -0.2 -0.5 +0.5 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 +0.1 +0.5 +0.2 +0.0
carbon source L-Histidine (C) +0.4 +0.1 -0.8 +0.3 +0.1
carbon source butyrate (C) +0.0 -0.2 -0.3 +0.9 -0.4
carbon source L-Alanine (C) +0.3 -0.2 +0.3 -0.4 +0.2
plant outgrowth control Plant outgrowth control +0.2 +0.1 +0.4 -0.7 +0.2
carbon source D-Glucuronic Acid (C) +0.5 -0.1 +0.4 -0.6 +0.1
r2a outgrowth control R2A outgrowth control -0.3 +0.3 +0.3 -0.3 +0.4
carbon source propionate (C) +0.4 +0.1 +0.3 -0.5 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.4 -0.1 +1.0 -0.2
carbon source L-Tryptophan (C) +0.7 +0.2 +0.2 -0.4 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.5 +0.3 -0.0 +0.3 -0.2
carbon source Gly-Glu (C) +0.3 +0.0 -0.2 +0.7 +0.1
carbon source Ethanol (C) +0.2 -0.2 +0.1 +0.8 +0.1
carbon source acetate (C) +0.6 -0.2 -0.0 +0.6 +0.0
carbon source L-Fucose (C) +0.8 +0.2 +0.5 -0.1 -0.3
carbon source L-Threonine (C) +0.3 +0.2 +0.3 +0.5 -0.1
carbon source D-Mannose (C) +0.5 +0.1 -0.2 +0.9 -0.1
carbon source D-Ribose (C) +0.3 +0.1 +0.6 +0.2 +0.1
carbon source D-Arabinose (C) +0.1 -0.1 +0.5 +0.5 +0.3
carbon source L-Lactate (C) +0.7 +0.3 +0.2 -0.1 +0.3
carbon source L-Lactate (C) +0.5 +0.0 +0.5 +0.4 +0.1
carbon source D-Mannose (C) +0.7 +0.4 +0.1 +0.4 +0.2
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ABID97_RS08025
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ABID97_RS08030
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ABID97_RS08040
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ABID97_RS08045
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