Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS08015 and ABID97_RS08020 are separated by 14 nucleotidesABID97_RS08020 and ABID97_RS08025 are separated by 85 nucleotidesABID97_RS08025 and ABID97_RS08030 are separated by 82 nucleotidesABID97_RS08030 and ABID97_RS08035 are separated by 28 nucleotides ABID97_RS08015: ABID97_RS08015 - LysR substrate-binding domain-containing protein, at 1,685,092 to 1,685,976 _RS08015 ABID97_RS08020: ABID97_RS08020 - helix-turn-helix domain-containing protein, at 1,685,991 to 1,686,593 _RS08020 ABID97_RS08025: ABID97_RS08025 - nuclear transport factor 2 family protein, at 1,686,679 to 1,687,101 _RS08025 ABID97_RS08030: ABID97_RS08030 - cyanase, at 1,687,184 to 1,687,627 _RS08030 ABID97_RS08035: ABID97_RS08035 - SDR family oxidoreductase, at 1,687,656 to 1,688,408 _RS08035
Group Condition ABID97_RS08015 ABID97_RS08020 ABID97_RS08025 ABID97_RS08030 ABID97_RS08035
carbon source L-Lactate (C) -7.5 +0.6 +0.5 +0.0 +0.5
carbon source L-Lactate (C) -6.5 +0.1 +0.7 +0.3 +0.2
carbon source D,L-Lactate (C) -6.0 +0.4 +0.4 +0.0 -0.1
carbon source D,L-Lactate (C) -3.0 +0.0 +0.4 -0.0 -0.4
carbon source L-tyrosine (C) -0.7 -0.3 +0.0 +0.3 -0.7
carbon source D,L-Malic Acid (C) -0.1 -0.3 -0.2 -0.5 -0.4
carbon source L-Histidine (C) +0.3 -1.0 +0.4 +0.1 -0.8
carbon source D-Sorbitol (C) -0.8 -0.1 +0.5 -0.1 -0.5
phage V1_1 -0.1 +0.1 +0.4 -0.1 -1.2
carbon source D-Serine (C) +0.1 -0.4 +0.3 -0.3 -0.4
carbon source Tween 20 (C) -0.4 -0.4 +0.4 -0.1 +0.0
carbon source L-Glutamine (C) -0.2 +0.4 +0.2 -0.4 -0.4
carbon source L-Malic (C) +0.0 -0.1 +0.8 -0.3 -0.6
carbon source L-Proline (C) +0.3 -0.2 +0.4 -0.2 -0.2
carbon source D-Galactose (C) -0.4 +0.3 +0.5 +0.0 -0.4
carbon source D-Glucuronic Acid (C) -0.4 -0.4 +0.5 -0.1 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.2 +0.5 -0.4 -0.1
phage V2_100 +0.3 +0.1 -0.4 +0.1 +0.4
carbon source D-Ribose (C) +0.3 -0.5 +0.4 -0.0 +0.2
carbon source Glycerol (C) -0.2 +0.2 +0.7 +0.1 -0.2
carbon source Glycerol (C) +0.3 +0.3 +0.4 -0.1 -0.2
carbon source a-Ketoglutaric (C) +0.6 +0.2 +0.2 +0.1 -0.2
carbon source D,L-Malic Acid (C) -0.2 +0.3 +0.8 +0.1 -0.0
carbon source L-Histidine (C) +0.2 -0.2 +0.5 +0.4 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +0.1 -0.8 +0.1 +0.5
carbon source propionate (C) -0.2 +0.3 +0.4 +0.1 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.5 -0.1 +0.4 +0.1 +0.2
carbon source L-Fucose (C) +0.0 -0.3 +0.8 +0.2 +0.5
carbon source L-Tryptophan (C) -0.1 +0.3 +0.7 +0.2 +0.2
carbon source D-Mannose (C) +0.1 +0.3 +0.7 +0.4 +0.1
remove
ABID97_RS08015
plot		 remove
ABID97_RS08020
plot		 remove
ABID97_RS08025		 remove
ABID97_RS08030
plot		 remove
ABID97_RS08035
plot