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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS07950 and ABID97_RS07955 are separated by 51 nucleotides
ABID97_RS07955 and ABID97_RS07960 are separated by 3 nucleotides
ABID97_RS07960 and ABID97_RS07965 are separated by 124 nucleotides
ABID97_RS07965 and ABID97_RS07970 are separated by 190 nucleotides
ABID97_RS07950: ABID97_RS07950 - acyl-CoA dehydrogenase, at 1,669,893 to 1,672,220
_RS07950
ABID97_RS07955: ABID97_RS07955 - tripartite tricarboxylate transporter substrate binding protein, at 1,672,272 to 1,673,267
_RS07955
ABID97_RS07960: ABID97_RS07960 - class I adenylate-forming enzyme family protein, at 1,673,271 to 1,674,767
_RS07960
ABID97_RS07965: ABID97_RS07965 - DUF3606 domain-containing protein, at 1,674,892 to 1,675,071
_RS07965
ABID97_RS07970: ABID97_RS07970 - hypothetical protein, at 1,675,262 to 1,675,939
_RS07970
Group
Condition
ABID97
_RS07950
ABID97
_RS07955
ABID97
_RS07960
ABID97
_RS07965
ABID97
_RS07970
carbon source
L-Alanine (C)
+0.2
+0.2
+0.1
N.D.
-1.6
carbon source
Glucuronamide (C)
-0.2
+0.1
+0.0
N.D.
-0.9
carbon source
D-Mannose (C)
+0.1
+0.1
-0.0
N.D.
-1.0
phage
V2_100
+0.4
-0.5
-0.0
N.D.
-0.6
carbon source
L-Alanine (C)
+0.2
+0.2
-0.0
N.D.
-1.1
phage
V1_10
+0.1
-0.4
-0.0
N.D.
-0.4
carbon source
D-Gluconic Acid (C)
-0.2
+0.2
-0.0
N.D.
-0.5
carbon source
D-Glucose (C)
+0.3
+0.2
-0.1
N.D.
-0.7
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.4
-0.0
N.D.
-0.6
carbon source
D-Gluconic Acid (C)
+0.5
+0.1
-0.1
N.D.
-0.6
carbon source
L-Fucose (C)
+0.5
-0.2
-0.0
N.D.
-0.3
carbon source
succinate (C)
-0.4
+0.2
-0.0
N.D.
+0.3
carbon source
Ethanol (C)
-0.3
+0.2
-0.0
N.D.
+0.4
carbon source
L-Fucose (C)
+0.4
+0.3
-0.1
N.D.
-0.3
carbon source
L-tyrosine (C)
+0.3
+0.1
-0.5
N.D.
+0.4
carbon source
D-Arabinose (C)
-0.2
-0.1
-0.0
N.D.
+0.7
carbon source
D-Serine (C)
+0.5
+0.5
+0.1
N.D.
-0.6
carbon source
Tween 20 (C)
+0.6
+0.3
-0.1
N.D.
-0.0
carbon source
butyrate (C)
-0.0
+0.5
-0.1
N.D.
+0.3
carbon source
butyrate (C)
+0.0
-0.1
+0.1
N.D.
+0.8
carbon source
L-Glutamic (C)
+0.2
+0.3
-0.2
N.D.
+0.4
carbon source
L-Histidine (C)
+0.4
-0.0
-0.1
N.D.
+0.5
carbon source
D-Ribose (C)
-0.1
+0.1
+0.1
N.D.
+0.7
carbon source
D-Arabinose (C)
+0.1
-0.0
+0.1
N.D.
+0.8
carbon source
2-Deoxy-D-Ribose (C)
+0.2
+0.2
+0.1
N.D.
+0.5
carbon source
L-Glutamine (C)
+0.3
+0.3
-0.0
N.D.
+0.5
carbon source
L-Threonine (C)
+0.1
+0.4
+0.1
N.D.
+0.5
carbon source
a-Ketoglutaric (C)
+0.1
+0.4
+0.0
N.D.
+0.6
carbon source
D-Ribose (C)
+0.2
+0.5
-0.0
N.D.
+0.6
carbon source
propionate (C)
-0.1
+0.1
+0.0
N.D.
+2.4
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