Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS07880 and ABID97_RS07885 are separated by 10 nucleotidesABID97_RS07885 and ABID97_RS07890 overlap by 11 nucleotidesABID97_RS07890 and ABID97_RS07895 are separated by 38 nucleotidesABID97_RS07895 and ABID97_RS07900 are separated by 108 nucleotides ABID97_RS07880: ABID97_RS07880 - cysteine synthase CysM, at 1,655,264 to 1,656,166 _RS07880 ABID97_RS07885: ABID97_RS07885 - NUDIX domain-containing protein, at 1,656,177 to 1,656,755 _RS07885 ABID97_RS07890: ABID97_RS07890 - sulfurtransferase TusA family protein, at 1,656,745 to 1,656,972 _RS07890 ABID97_RS07895: ABID97_RS07895 - UTP--glucose-1-phosphate uridylyltransferase GalU, at 1,657,011 to 1,657,901 _RS07895 ABID97_RS07900: ABID97_RS07900 - valine--tRNA ligase, at 1,658,010 to 1,660,907 _RS07900
Group Condition ABID97_RS07880 ABID97_RS07885 ABID97_RS07890 ABID97_RS07895 ABID97_RS07900
carbon source D-Glucose (C) N.D. -0.7 N.D. N.D. N.D.
carbon source L-Tryptophan (C) N.D. -0.6 N.D. N.D. N.D.
carbon source butyrate (C) N.D. -0.6 N.D. N.D. N.D.
carbon source L-Lactate (C) N.D. -0.6 N.D. N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.6 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) N.D. -0.6 N.D. N.D. N.D.
carbon source Gly-Glu (C) N.D. -0.5 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. -0.4 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -0.4 N.D. N.D. N.D.
carbon source Fumarate (C) N.D. -0.4 N.D. N.D. N.D.
carbon source Tween 20 (C) N.D. -0.4 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) N.D. -0.3 N.D. N.D. N.D.
carbon source D-Fructose (C) N.D. -0.3 N.D. N.D. N.D.
carbon source succinate (C) N.D. -0.3 N.D. N.D. N.D.
carbon source D-Fructose (C) N.D. -0.3 N.D. N.D. N.D.
carbon source L-Alanine (C) N.D. -0.3 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.3 N.D. N.D. N.D.
carbon source Glycerol (C) N.D. -0.3 N.D. N.D. N.D.
carbon source butyrate (C) N.D. -0.3 N.D. N.D. N.D.
carbon source L-Leucine (C) N.D. -0.3 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.3 N.D. N.D. N.D.
carbon source L-Lactate (C) N.D. -0.2 N.D. N.D. N.D.
carbon source Ethanol (C) N.D. -0.2 N.D. N.D. N.D.
carbon source D-Lactate (C) N.D. -0.2 N.D. N.D. N.D.
carbon source D,L-Lactate (C) N.D. +0.2 N.D. N.D. N.D.
carbon source acetate (C) N.D. +0.3 N.D. N.D. N.D.
carbon source Formate (C) N.D. +0.3 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.3 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. +0.3 N.D. N.D. N.D.
carbon source Formate (C) N.D. +0.4 N.D. N.D. N.D.
remove
ABID97_RS07880
plot		 remove
ABID97_RS07885
plot		 remove
ABID97_RS07890		 remove
ABID97_RS07895
plot		 remove
ABID97_RS07900
plot