Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS07825 and ABID97_RS07830 are separated by 151 nucleotidesABID97_RS07830 and ABID97_RS07835 are separated by 30 nucleotidesABID97_RS07835 and ABID97_RS07840 are separated by 238 nucleotidesABID97_RS07840 and ABID97_RS07845 are separated by 11 nucleotides ABID97_RS07825: ABID97_RS07825 - DNA translocase FtsK 4TM domain-containing protein, at 1,643,545 to 1,645,929 _RS07825 ABID97_RS07830: ABID97_RS07830 - outer membrane lipoprotein chaperone LolA, at 1,646,081 to 1,646,713 _RS07830 ABID97_RS07835: ABID97_RS07835 - replication-associated recombination protein A, at 1,646,744 to 1,648,036 _RS07835 ABID97_RS07840: ABID97_RS07840 - branched-chain amino acid ABC transporter permease, at 1,648,275 to 1,649,204 _RS07840 ABID97_RS07845: ABID97_RS07845 - ABC transporter ATP-binding protein, at 1,649,216 to 1,650,412 _RS07845
Group Condition ABID97_RS07825 ABID97_RS07830 ABID97_RS07835 ABID97_RS07840 ABID97_RS07845
carbon source L-Proline (C) N.D. N.D. +0.7 -7.5 -5.5
carbon source L-Tryptophan (C) N.D. N.D. +1.0 -5.9 -6.5
carbon source L-Proline (C) N.D. N.D. +0.7 -6.7 -5.0
carbon source L-Tryptophan (C) N.D. N.D. +1.3 -6.6 -5.4
carbon source L-Leucine (C) N.D. N.D. +0.7 -5.5 -5.2
carbon source L-Leucine (C) N.D. N.D. +0.8 -5.6 -5.2
carbon source L-Histidine (C) N.D. N.D. +0.4 -4.9 -4.9
carbon source L-Histidine (C) N.D. N.D. +0.6 -3.9 -3.6
carbon source L-Alanine (C) N.D. N.D. +1.4 -4.4 -3.3
carbon source L-Phenylalanine (C) N.D. N.D. +0.1 -3.1 -3.4
carbon source casaminos (C) N.D. N.D. -0.3 -3.2 -2.8
carbon source casaminos (C) N.D. N.D. -0.1 -3.2 -2.8
carbon source L-Phenylalanine (C) N.D. N.D. -0.0 -3.2 -2.8
carbon source L-Alanine (C) N.D. N.D. +1.6 -4.1 -2.9
carbon source L-Threonine (C) N.D. N.D. -0.9 -1.6 -1.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.2 -1.4 -1.9
r2a outgrowth control R2A outgrowth control N.D. N.D. -0.1 -1.7 -1.6
carbon source L-Threonine (C) N.D. N.D. -1.4 -0.8 -0.9
r2a outgrowth control R2A outgrowth control N.D. N.D. -0.0 -1.4 -1.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.1 -1.2 -1.4
carbon source D-Fructose (C) N.D. N.D. -0.1 -1.5 -1.1
carbon source Gly-Glu (C) N.D. N.D. -0.4 -1.1 -1.1
carbon source butyrate (C) N.D. N.D. -0.1 -1.3 -1.2
carbon source propionate (C) N.D. N.D. +0.7 -1.6 -1.5
carbon source D-Fructose (C) N.D. N.D. +0.1 -1.1 -1.2
carbon source Gly-Glu (C) N.D. N.D. +0.1 -1.2 -1.1
carbon source propionate (C) N.D. N.D. +0.5 -1.2 -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.0 -1.0 -1.0
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.3 -0.9 -1.0
carbon source D-Xylose (C) N.D. N.D. -0.0 +1.0 +1.0
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ABID97_RS07825
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