Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS07820 and ABID97_RS07825 are separated by 97 nucleotidesABID97_RS07825 and ABID97_RS07830 are separated by 151 nucleotidesABID97_RS07830 and ABID97_RS07835 are separated by 30 nucleotidesABID97_RS07835 and ABID97_RS07840 are separated by 238 nucleotides ABID97_RS07820: ABID97_RS07820 - Crp/Fnr family transcriptional regulator, at 1,642,773 to 1,643,447 _RS07820 ABID97_RS07825: ABID97_RS07825 - DNA translocase FtsK 4TM domain-containing protein, at 1,643,545 to 1,645,929 _RS07825 ABID97_RS07830: ABID97_RS07830 - outer membrane lipoprotein chaperone LolA, at 1,646,081 to 1,646,713 _RS07830 ABID97_RS07835: ABID97_RS07835 - replication-associated recombination protein A, at 1,646,744 to 1,648,036 _RS07835 ABID97_RS07840: ABID97_RS07840 - branched-chain amino acid ABC transporter permease, at 1,648,275 to 1,649,204 _RS07840
Group Condition ABID97_RS07820 ABID97_RS07825 ABID97_RS07830 ABID97_RS07835 ABID97_RS07840
carbon source L-Proline (C) +0.6 N.D. N.D. +0.7 -7.5
carbon source L-Proline (C) +0.2 N.D. N.D. +0.7 -6.7
carbon source L-Leucine (C) +0.3 N.D. N.D. +0.7 -5.5
carbon source L-Leucine (C) +0.4 N.D. N.D. +0.8 -5.6
carbon source L-Tryptophan (C) +1.2 N.D. N.D. +1.3 -6.6
carbon source L-Tryptophan (C) +1.1 N.D. N.D. +1.0 -5.9
carbon source L-Histidine (C) +0.9 N.D. N.D. +0.4 -4.9
carbon source casaminos (C) -0.1 N.D. N.D. -0.3 -3.2
carbon source casaminos (C) +0.2 N.D. N.D. -0.1 -3.2
carbon source L-Alanine (C) +0.2 N.D. N.D. +1.4 -4.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 N.D. N.D. -0.2 -1.4
carbon source L-Histidine (C) +0.8 N.D. N.D. +0.6 -3.9
carbon source L-Threonine (C) +0.2 N.D. N.D. -0.9 -1.6
carbon source L-Alanine (C) +0.3 N.D. N.D. +1.6 -4.1
r2a outgrowth control R2A outgrowth control +0.0 N.D. N.D. -0.1 -1.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. N.D. -0.1 -1.2
carbon source L-Threonine (C) +0.5 N.D. N.D. -1.4 -0.8
carbon source propionate (C) -0.1 N.D. N.D. +0.7 -1.6
carbon source L-Phenylalanine (C) +2.8 N.D. N.D. -0.0 -3.2
carbon source D-Gluconic Acid (C) +0.9 N.D. N.D. +0.1 -0.9
carbon source L-Phenylalanine (C) +3.2 N.D. N.D. +0.1 -3.1
carbon source D-Gluconic Acid (C) +1.2 N.D. N.D. +0.2 -1.0
carbon source Glycolic Acid (C) +0.8 N.D. N.D. +0.4 -0.7
carbon source L-tyrosine (C) +1.1 N.D. N.D. +0.2 -0.6
carbon source 2-Deoxy-D-Ribose (C) +1.3 N.D. N.D. +0.1 -0.6
carbon source D-Glucose (C) +2.3 N.D. N.D. +0.0 -1.0
carbon source D-Xylose (C) +1.1 N.D. N.D. -0.3 +0.6
carbon source D-Xylose (C) +1.1 N.D. N.D. -0.0 +1.0
carbon source D-Glucose (C) +2.9 N.D. N.D. +0.2 -0.8
carbon source D-Glucuronic Acid (C) +2.3 N.D. N.D. +0.3 -0.1
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