Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS07465 and ABID97_RS07470 are separated by 49 nucleotidesABID97_RS07470 and ABID97_RS07475 are separated by 17 nucleotidesABID97_RS07475 and ABID97_RS07480 are separated by 267 nucleotidesABID97_RS07480 and ABID97_RS07485 are separated by 26 nucleotides ABID97_RS07465: ABID97_RS07465 - SulP family inorganic anion transporter, at 1,574,796 to 1,576,472 _RS07465 ABID97_RS07470: ABID97_RS07470 - hypothetical protein, at 1,576,522 to 1,576,719 _RS07470 ABID97_RS07475: ABID97_RS07475 - methionine--tRNA ligase, at 1,576,737 to 1,578,830 _RS07475 ABID97_RS07480: ABID97_RS07480 - isocitrate/isopropylmalate family dehydrogenase, at 1,579,098 to 1,580,129 _RS07480 ABID97_RS07485: ABID97_RS07485 - phosphodiester glycosidase family protein, at 1,580,156 to 1,580,872 _RS07485
Group Condition ABID97_RS07465 ABID97_RS07470 ABID97_RS07475 ABID97_RS07480 ABID97_RS07485
phage V2_100 -0.4 N.D. N.D. -0.0 -0.3
plant outgrowth control Plant outgrowth control -0.5 N.D. N.D. -0.1 +0.2
carbon source L-Threonine (C) +0.5 N.D. N.D. -0.4 -0.3
carbon source L-Threonine (C) +0.5 N.D. N.D. -0.5 -0.1
carbon source Fumarate (C) -0.3 N.D. N.D. +0.1 +0.3
carbon source Glucuronamide (C) +0.4 N.D. N.D. -0.1 -0.2
carbon source L-Malic (C) +0.5 N.D. N.D. -0.1 -0.1
carbon source D-Sorbitol (C) -0.2 N.D. N.D. +0.2 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. N.D. +0.4 +0.4
carbon source D-Lactate (C) +0.5 N.D. N.D. +0.2 -0.1
carbon source D-Glucose (C) +0.0 N.D. N.D. +0.1 +0.5
carbon source Gly-Glu (C) +0.3 N.D. N.D. +0.2 +0.2
carbon source L-Proline (C) +0.3 N.D. N.D. +0.1 +0.3
carbon source propionate (C) +0.6 N.D. N.D. +0.0 +0.1
carbon source L-Leucine (C) +0.3 N.D. N.D. +0.3 +0.1
carbon source Gly-Glu (C) +0.3 N.D. N.D. +0.1 +0.3
carbon source L-Phenylalanine (C) +0.3 N.D. N.D. +0.2 +0.2
carbon source Tween 20 (C) +0.4 N.D. N.D. +0.2 +0.1
carbon source D-Xylose (C) +0.2 N.D. N.D. +0.1 +0.5
carbon source 2-Deoxy-D-Ribose (C) +0.7 N.D. N.D. +0.2 -0.1
carbon source propionate (C) +0.4 N.D. N.D. +0.2 +0.3
carbon source D-Galactose (C) +0.3 N.D. N.D. +0.2 +0.4
carbon source D-Glucose (C) +0.3 N.D. N.D. +0.3 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. N.D. +0.4 +0.5
carbon source Adenine (C) +0.2 N.D. N.D. +0.2 +0.5
carbon source 2-Deoxy-D-Ribose (C) +0.4 N.D. N.D. +0.2 +0.5
carbon source Adenine (C) +0.7 N.D. N.D. +0.2 +0.4
carbon source Fumarate (C) +0.6 N.D. N.D. +0.1 +0.6
carbon source butyrate (C) +0.2 N.D. N.D. +7.2 +1.4
carbon source butyrate (C) +0.3 N.D. N.D. +7.8 +1.2
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