Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS07225 and ABID97_RS07230 are separated by 92 nucleotidesABID97_RS07230 and ABID97_RS07235 are separated by 226 nucleotidesABID97_RS07235 and ABID97_RS07240 are separated by 88 nucleotidesABID97_RS07240 and ABID97_RS07245 overlap by 4 nucleotides ABID97_RS07225: ABID97_RS07225 - sn-glycerol-3-phosphate ABC transporter permease UgpA, at 1,530,859 to 1,531,740 _RS07225 ABID97_RS07230: ABID97_RS07230 - sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB, at 1,531,833 to 1,533,143 _RS07230 ABID97_RS07235: ABID97_RS07235 - phosphoglycerate dehydrogenase, at 1,533,370 to 1,534,602 _RS07235 ABID97_RS07240: ABID97_RS07240 - FAD/FMN-binding oxidoreductase, at 1,534,691 to 1,538,569 _RS07240 ABID97_RS07245: ABID97_RS07245 - HIT family protein, at 1,538,566 to 1,539,006 _RS07245
Group Condition ABID97_RS07225 ABID97_RS07230 ABID97_RS07235 ABID97_RS07240 ABID97_RS07245
carbon source Glucuronamide (C) -0.0 -0.1 -0.3 -0.1 -2.2
phage V2_100 -0.6 +0.1 +0.0 +0.3 -2.0
carbon source D-Arabinose (C) +0.0 -0.1 -0.3 -0.2 -1.0
carbon source butyrate (C) -0.1 -0.0 -0.1 -0.1 -1.2
carbon source L-Glutamic (C) +0.1 -0.0 -0.1 -0.8 -0.4
carbon source D,L-Lactate (C) +0.1 +0.1 -0.2 -0.4 -0.8
carbon source L-Lactate (C) +0.1 +0.0 -0.4 -0.2 -0.8
carbon source L-Glutamic (C) -0.1 +0.0 -0.1 -0.9 -0.2
carbon source L-Glutamine (C) +0.1 +0.0 -0.2 -0.9 -0.1
carbon source L-Phenylalanine (C) +0.1 +0.0 +0.1 -0.0 -1.2
carbon source L-Proline (C) +0.2 +0.1 -0.2 -0.0 -1.0
carbon source L-tyrosine (C) +0.1 +0.0 +0.2 -0.1 -1.1
carbon source a-Ketoglutaric (C) +0.2 +0.0 -0.2 -0.3 -0.6
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.0 -0.3 -0.1 -0.6
carbon source L-Glutamine (C) -0.1 -0.0 -0.4 -0.9 +0.7
carbon source L-Leucine (C) +0.2 -0.0 -0.3 -0.2 -0.4
carbon source D-Glucose (C) +0.2 +0.1 +0.1 +0.0 -1.0
carbon source Tween 20 (C) +0.1 +0.1 -0.3 -0.5 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.1 +0.3 -1.0 +0.1
carbon source L-Histidine (C) +0.2 +0.1 +0.3 +0.0 -1.0
carbon source Formate (C) +0.2 -0.0 +0.4 -0.1 -0.7
carbon source Tween 20 (C) -0.1 -0.0 +0.1 -0.5 +0.4
carbon source acetate (C) +0.1 +0.1 -0.1 -0.4 +0.4
carbon source D-Sorbitol (C) -0.1 +0.1 -0.1 -0.5 +0.5
carbon source D-Galactose (C) +0.2 +0.0 -0.3 -0.3 +0.6
carbon source D-Sorbitol (C) -0.1 +0.1 +0.2 -0.4 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.4 +0.6 -0.9 +0.0
carbon source L-Arabinose (C) +0.1 +0.0 +0.1 -0.2 +0.8
carbon source L-Histidine (C) +0.1 +0.2 -0.2 +0.1 +0.6
carbon source Gly-Glu (C) +0.3 +0.1 +0.2 -0.1 +0.5
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ABID97_RS07225
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ABID97_RS07230
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ABID97_RS07240
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ABID97_RS07245
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