Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS07215 and ABID97_RS07220 are separated by 136 nucleotidesABID97_RS07220 and ABID97_RS07225 are separated by 45 nucleotidesABID97_RS07225 and ABID97_RS07230 are separated by 92 nucleotidesABID97_RS07230 and ABID97_RS07235 are separated by 226 nucleotides ABID97_RS07215: ABID97_RS07215 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 1,528,821 to 1,529,828 _RS07215 ABID97_RS07220: ABID97_RS07220 - sn-glycerol-3-phosphate ABC transporter permease UgpE, at 1,529,965 to 1,530,813 _RS07220 ABID97_RS07225: ABID97_RS07225 - sn-glycerol-3-phosphate ABC transporter permease UgpA, at 1,530,859 to 1,531,740 _RS07225 ABID97_RS07230: ABID97_RS07230 - sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB, at 1,531,833 to 1,533,143 _RS07230 ABID97_RS07235: ABID97_RS07235 - phosphoglycerate dehydrogenase, at 1,533,370 to 1,534,602 _RS07235
Group Condition ABID97_RS07215 ABID97_RS07220 ABID97_RS07225 ABID97_RS07230 ABID97_RS07235
phage V1_10 -0.1 +0.2 -0.3 -0.1 -0.4
phage V2_100 -0.1 -0.1 -0.6 +0.1 +0.0
carbon source L-Glutamine (C) -0.1 +0.1 -0.1 -0.0 -0.4
phage V1_1 +0.1 +0.1 -0.2 -0.1 -0.2
carbon source L-Leucine (C) -0.1 -0.0 +0.1 +0.2 -0.3
carbon source 2-Deoxy-D-Ribose (C) -0.2 +0.2 +0.1 +0.0 -0.3
carbon source L-Leucine (C) +0.1 +0.0 +0.2 -0.0 -0.3
carbon source D,L-Malic Acid (C) -0.3 +0.3 -0.1 -0.0 +0.2
carbon source Adenine (C) +0.1 -0.2 -0.1 -0.0 +0.2
carbon source D-Galactose (C) +0.1 +0.1 +0.2 +0.0 -0.3
carbon source Glycolic Acid (C) +0.2 +0.2 +0.1 -0.2 -0.1
carbon source L-Histidine (C) +0.0 +0.1 +0.1 +0.2 -0.2
carbon source a-Ketoglutaric (C) -0.2 +0.1 +0.3 -0.1 +0.1
phage V2_10 +0.2 +0.1 -0.0 +0.1 -0.1
carbon source L-Proline (C) +0.1 +0.2 +0.2 +0.1 -0.2
carbon source D-Lactate (C) +0.3 +0.2 -0.0 +0.2 -0.2
r2a outgrowth control R2A outgrowth control +0.2 +0.1 +0.2 +0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.1 +0.1 +0.1 +0.3
carbon source L-Tryptophan (C) +0.1 +0.2 +0.2 +0.1 -0.0
carbon source Formate (C) -0.0 +0.0 +0.2 -0.0 +0.4
carbon source D-Sorbitol (C) +0.1 +0.3 -0.1 +0.1 +0.2
carbon source casaminos (C) +0.3 +0.1 -0.0 +0.0 +0.2
carbon source L-Alanine (C) +0.5 +0.1 +0.3 -0.0 -0.2
carbon source D-Glucuronic Acid (C) +0.0 +0.2 +0.2 +0.1 +0.1
carbon source L-Phenylalanine (C) +0.2 +0.2 +0.0 +0.1 +0.3
carbon source L-Histidine (C) +0.2 -0.0 +0.2 +0.1 +0.3
carbon source Gly-Glu (C) +0.2 +0.2 +0.3 +0.1 +0.2
plant outgrowth control Plant outgrowth control +0.3 +0.1 +0.1 +0.0 +0.5
carbon source D-Fructose (C) +0.3 +0.3 +0.2 +0.2 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -0.0 +0.5 +0.4 +0.6
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ABID97_RS07215
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ABID97_RS07220
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ABID97_RS07230
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ABID97_RS07235
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