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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS07005 and ABID97_RS07010 are separated by 95 nucleotides
ABID97_RS07010 and ABID97_RS07015 are separated by 277 nucleotides
ABID97_RS07015 and ABID97_RS07020 are separated by 12 nucleotides
ABID97_RS07020 and ABID97_RS07025 are separated by 282 nucleotides
ABID97_RS07005: ABID97_RS07005 - hypothetical protein, at 1,482,280 to 1,483,410
_RS07005
ABID97_RS07010: ABID97_RS07010 - porin, at 1,483,506 to 1,484,618
_RS07010
ABID97_RS07015: ABID97_RS07015 - OsmC family protein, at 1,484,896 to 1,485,345
_RS07015
ABID97_RS07020: ABID97_RS07020 - 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase, at 1,485,358 to 1,485,987
_RS07020
ABID97_RS07025: ABID97_RS07025 - porin, at 1,486,270 to 1,487,514
_RS07025
Group
Condition
ABID97
_RS07005
ABID97
_RS07010
ABID97
_RS07015
ABID97
_RS07020
ABID97
_RS07025
carbon source
L-Histidine (C)
-0.3
-0.9
-1.6
N.D.
N.D.
carbon source
L-Histidine (C)
-0.1
-0.7
-1.6
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-0.0
-0.4
-1.5
N.D.
N.D.
carbon source
L-Leucine (C)
-0.2
-0.2
-1.0
N.D.
N.D.
carbon source
L-Leucine (C)
-0.1
-0.3
-1.0
N.D.
N.D.
carbon source
Gly-Glu (C)
-0.2
-0.1
-0.9
N.D.
N.D.
carbon source
Gly-Glu (C)
-0.1
-0.1
-0.9
N.D.
N.D.
carbon source
D-Fructose (C)
-0.1
-0.3
-0.5
N.D.
N.D.
carbon source
pyruvate (C)
-0.1
-0.3
-0.6
N.D.
N.D.
carbon source
D-Mannose (C)
-0.2
-0.2
-0.5
N.D.
N.D.
carbon source
D-Arabinose (C)
-0.3
-0.5
-0.1
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.1
+0.1
-0.7
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
+0.1
+0.1
-0.9
N.D.
N.D.
carbon source
Glycolic Acid (C)
+0.2
+0.2
-0.8
N.D.
N.D.
carbon source
D-Glucuronic Acid (C)
+0.2
+0.1
-0.5
N.D.
N.D.
carbon source
Glycolic Acid (C)
+0.2
+0.3
-0.4
N.D.
N.D.
carbon source
D-Xylose (C)
+0.3
+0.4
+0.2
N.D.
N.D.
phage
V1_10
+0.1
+0.4
+0.3
N.D.
N.D.
carbon source
acetate (C)
+0.3
+0.5
+0.2
N.D.
N.D.
phage
V1_10
+0.1
+0.4
+0.6
N.D.
N.D.
phage
V2_10
+0.0
+0.4
+0.6
N.D.
N.D.
phage
V2_10
+0.2
+0.4
+0.6
N.D.
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
+0.7
+0.7
+0.0
N.D.
N.D.
carbon source
Glucuronamide (C)
+0.2
+0.7
+0.6
N.D.
N.D.
carbon source
acetate (C)
+0.5
+0.7
+0.3
N.D.
N.D.
carbon source
Glucuronamide (C)
+0.3
+0.6
+0.9
N.D.
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
+0.8
+0.8
+0.2
N.D.
N.D.
phage
V2_100
+0.4
+0.9
+1.3
N.D.
N.D.
carbon source
butyrate (C)
+0.4
+1.7
+2.3
N.D.
N.D.
carbon source
butyrate (C)
+0.6
+1.8
+2.3
N.D.
N.D.
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