Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS06875 and ABID97_RS06880 are separated by 27 nucleotidesABID97_RS06880 and ABID97_RS06885 are separated by 147 nucleotidesABID97_RS06885 and ABID97_RS06890 are separated by 80 nucleotidesABID97_RS06890 and ABID97_RS06895 are separated by 171 nucleotides ABID97_RS06875: ABID97_RS06875 - dihydrodipicolinate synthase family protein, at 1,452,568 to 1,453,485 _RS06875 ABID97_RS06880: ABID97_RS06880 - hypothetical protein, at 1,453,513 to 1,453,767 _RS06880 ABID97_RS06885: ABID97_RS06885 - hypothetical protein, at 1,453,915 to 1,454,451 _RS06885 ABID97_RS06890: ABID97_RS06890 - hypothetical protein, at 1,454,532 to 1,454,945 _RS06890 ABID97_RS06895: ABID97_RS06895 - cyanophycin synthetase, at 1,455,117 to 1,457,684 _RS06895
Group Condition ABID97_RS06875 ABID97_RS06880 ABID97_RS06885 ABID97_RS06890 ABID97_RS06895
carbon source L-tyrosine (C) -2.5 -0.7 +0.0 -0.2 -0.7
carbon source L-Arabinose (C) -1.7 -0.2 -0.1 +0.1 -0.5
carbon source propionate (C) -1.5 +0.1 -0.0 -0.4 +0.0
carbon source L-Arabinose (C) -1.5 +0.8 +0.4 -0.5 -0.5
carbon source L-Malic (C) -0.2 +0.3 +0.2 -0.3 -1.0
carbon source butyrate (C) -1.3 -0.2 +0.3 +0.1 -0.1
carbon source D-Fructose (C) -0.3 -0.6 -0.3 +0.4 -0.2
carbon source succinate (C) -0.3 -0.7 +0.4 +0.4 -0.8
carbon source L-Fucose (C) +0.4 -0.9 +0.3 -0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +0.8 -0.5 +0.0 -0.3
carbon source Glycolic Acid (C) +0.1 -0.4 -0.5 +0.5 -0.3
carbon source L-Malic (C) +0.0 -0.2 +0.4 +0.5 -1.1
carbon source D,L-Malic Acid (C) -0.3 +0.7 -0.0 -0.3 -0.4
carbon source L-Glutamic (C) +0.3 -0.3 -0.3 +0.5 -0.5
carbon source Fumarate (C) +0.5 -0.3 +0.3 -0.2 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.6 -0.7 -0.5 -0.3
carbon source L-Fucose (C) -0.8 +0.3 +0.6 -0.1 -0.1
carbon source L-Glutamine (C) -0.5 -0.2 +0.3 +0.7 -0.4
carbon source L-Phenylalanine (C) -0.4 -0.5 +0.4 +0.4 +0.1
carbon source L-Histidine (C) -0.5 +0.3 -0.3 +0.5 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -0.3 +0.6 +0.6 +0.1
carbon source D-Gluconic Acid (C) +0.6 -0.3 +0.4 +0.3 -0.3
carbon source Fumarate (C) +0.5 +0.5 +0.6 -0.0 -0.6
carbon source pyruvate (C) +0.7 +0.1 +0.1 +0.5 -0.4
r2a outgrowth control R2A outgrowth control +0.5 -0.0 +0.3 +0.7 -0.3
carbon source 2-Deoxy-D-Ribose (C) +0.3 -0.4 +0.3 +0.8 +0.1
phage V2_10 -0.2 +0.2 +0.6 -0.1 +0.6
carbon source D-Glucose (C) +0.7 +0.5 +0.6 +0.2 -0.1
carbon source L-Alanine (C) +1.0 -0.1 +0.8 +0.4 -0.0
phage V2_100 +0.9 +1.1 +0.7 +0.3 +1.1
remove
ABID97_RS06875
plot		 remove
ABID97_RS06880
plot		 remove
ABID97_RS06885		 remove
ABID97_RS06890
plot		 remove
ABID97_RS06895
plot