Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS06610 and ABID97_RS06615 are separated by 51 nucleotidesABID97_RS06615 and ABID97_RS06620 are separated by 91 nucleotidesABID97_RS06620 and ABID97_RS06625 are separated by 28 nucleotidesABID97_RS06625 and ABID97_RS06630 overlap by 2 nucleotides ABID97_RS06610: ABID97_RS06610 - DUF2917 domain-containing protein, at 1,398,560 to 1,398,877 _RS06610 ABID97_RS06615: ABID97_RS06615 - BLUF domain-containing protein, at 1,398,929 to 1,399,333 _RS06615 ABID97_RS06620: ABID97_RS06620 - Crp/Fnr family transcriptional regulator, at 1,399,425 to 1,400,195 _RS06620 ABID97_RS06625: ABID97_RS06625 - DUF6279 family lipoprotein, at 1,400,224 to 1,401,111 _RS06625 ABID97_RS06630: ABID97_RS06630 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 1,401,110 to 1,402,540 _RS06630
Group Condition ABID97_RS06610 ABID97_RS06615 ABID97_RS06620 ABID97_RS06625 ABID97_RS06630
carbon source butyrate (C) N.D. +0.5 -1.5 -0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.0 -0.7 -0.2 N.D.
carbon source L-Phenylalanine (C) N.D. -0.1 -0.5 -0.2 N.D.
carbon source D-Galactose (C) N.D. -0.4 -0.2 -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.1 -0.6 -0.1 N.D.
carbon source butyrate (C) N.D. +0.7 -1.1 -0.2 N.D.
carbon source D,L-Malic Acid (C) N.D. +0.3 -0.8 -0.1 N.D.
carbon source acetate (C) N.D. +0.4 -1.0 -0.0 N.D.
carbon source D-Xylose (C) N.D. +0.3 -0.7 -0.2 N.D.
carbon source D-Glucose (C) N.D. +0.4 -0.8 -0.2 N.D.
carbon source D-Glucuronic Acid (C) N.D. +0.1 -0.6 -0.1 N.D.
carbon source Gly-Glu (C) N.D. +0.5 -0.8 -0.2 N.D.
carbon source Glucuronamide (C) N.D. +0.2 -0.5 -0.2 N.D.
carbon source L-Histidine (C) N.D. +0.9 -1.3 -0.2 N.D.
carbon source L-Leucine (C) N.D. +0.1 -0.5 -0.1 N.D.
carbon source D-Lactate (C) N.D. +0.2 -0.6 -0.0 N.D.
carbon source propionate (C) N.D. +0.2 -0.6 +0.0 N.D.
carbon source D-Mannose (C) N.D. +0.3 -0.6 -0.0 N.D.
carbon source Gly-Glu (C) N.D. +0.5 -0.7 -0.0 N.D.
carbon source Glycerol (C) N.D. +0.3 -0.5 +0.0 N.D.
carbon source L-Glutamine (C) N.D. +0.3 -0.4 -0.0 N.D.
carbon source L-Histidine (C) N.D. +0.8 -1.0 +0.0 N.D.
carbon source Glycerol (C) N.D. +0.4 -0.5 +0.0 N.D.
carbon source D-Xylose (C) N.D. +0.3 -0.3 -0.1 N.D.
carbon source Formate (C) N.D. +0.2 -0.4 +0.2 N.D.
carbon source propionate (C) N.D. +0.4 -0.1 -0.3 N.D.
carbon source D-Glucose (C) N.D. +0.4 -0.4 -0.1 N.D.
carbon source L-Fucose (C) N.D. -0.3 +0.5 -0.1 N.D.
carbon source L-Alanine (C) N.D. +0.6 -0.3 +0.1 N.D.
carbon source L-Phenylalanine (C) N.D. +0.6 -0.3 +0.0 N.D.
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