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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS06600 and ABID97_RS06605 are separated by 6 nucleotides
ABID97_RS06605 and ABID97_RS06610 are separated by 167 nucleotides
ABID97_RS06610 and ABID97_RS06615 are separated by 51 nucleotides
ABID97_RS06615 and ABID97_RS06620 are separated by 91 nucleotides
ABID97_RS06600: ABID97_RS06600 - 5-formyltetrahydrofolate cyclo-ligase, at 1,396,785 to 1,397,402
_RS06600
ABID97_RS06605: ABID97_RS06605 - LysR substrate-binding domain-containing protein, at 1,397,409 to 1,398,392
_RS06605
ABID97_RS06610: ABID97_RS06610 - DUF2917 domain-containing protein, at 1,398,560 to 1,398,877
_RS06610
ABID97_RS06615: ABID97_RS06615 - BLUF domain-containing protein, at 1,398,929 to 1,399,333
_RS06615
ABID97_RS06620: ABID97_RS06620 - Crp/Fnr family transcriptional regulator, at 1,399,425 to 1,400,195
_RS06620
Group
Condition
ABID97
_RS06600
ABID97
_RS06605
ABID97
_RS06610
ABID97
_RS06615
ABID97
_RS06620
carbon source
L-Histidine (C)
-1.9
-2.5
N.D.
+0.9
-1.3
carbon source
L-Threonine (C)
-3.6
-0.4
N.D.
+0.3
-0.3
carbon source
L-Leucine (C)
-3.5
-0.1
N.D.
+0.1
-0.5
carbon source
L-Histidine (C)
-1.9
-1.7
N.D.
+0.8
-1.0
carbon source
L-Threonine (C)
-3.1
-0.7
N.D.
+0.2
-0.1
carbon source
D-Galactose (C)
-2.4
+0.0
N.D.
-0.4
-0.2
carbon source
D-Mannose (C)
-2.4
-0.0
N.D.
+0.1
-0.4
carbon source
D-Mannose (C)
-2.3
-0.1
N.D.
+0.3
-0.6
carbon source
butyrate (C)
-1.7
+0.1
N.D.
+0.5
-1.5
carbon source
L-Arabinose (C)
-2.1
+0.1
N.D.
-0.1
-0.3
carbon source
L-Tryptophan (C)
-2.8
+0.0
N.D.
+0.5
-0.2
carbon source
4-Hydroxybenzoic Acid (C)
-1.7
+0.1
N.D.
+0.0
-0.7
carbon source
L-Tryptophan (C)
-2.1
-0.2
N.D.
+0.3
-0.2
carbon source
L-Leucine (C)
-2.1
+0.3
N.D.
+0.0
-0.3
carbon source
Glycolic Acid (C)
-1.7
+0.3
N.D.
+0.1
-0.4
carbon source
Glycerol (C)
-1.5
+0.1
N.D.
+0.3
-0.5
carbon source
L-Glutamic (C)
-1.6
+0.3
N.D.
+0.0
-0.3
carbon source
butyrate (C)
-1.2
+0.1
N.D.
+0.7
-1.1
carbon source
Gly-Glu (C)
-1.4
+0.2
N.D.
+0.5
-0.8
carbon source
L-Glutamic (C)
-1.8
+0.2
N.D.
+0.0
+0.1
carbon source
acetate (C)
-0.9
+0.1
N.D.
+0.4
-1.0
carbon source
D-Glucose (C)
-1.2
+0.3
N.D.
+0.4
-0.8
carbon source
D-Lactate (C)
-1.3
+0.4
N.D.
+0.2
-0.6
carbon source
L-Alanine (C)
-1.6
+0.1
N.D.
+0.6
-0.3
carbon source
D-Arabinose (C)
-1.8
-0.0
N.D.
+0.2
+0.4
carbon source
2-Deoxy-D-Ribose (C)
-1.7
+0.3
N.D.
+0.2
-0.0
carbon source
D-Gluconic Acid (C)
-1.7
+0.2
N.D.
+0.5
-0.1
carbon source
2-Deoxy-D-Ribose (C)
-1.7
+0.4
N.D.
+0.3
-0.1
carbon source
D-Gluconic Acid (C)
-1.6
+0.2
N.D.
+0.5
-0.1
carbon source
propionate (C)
-1.0
+0.6
N.D.
+0.2
-0.6
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