Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS06420 and ABID97_RS06425 are separated by 17 nucleotidesABID97_RS06425 and ABID97_RS06430 overlap by 4 nucleotidesABID97_RS06430 and ABID97_RS06435 are separated by 116 nucleotidesABID97_RS06435 and ABID97_RS06440 are separated by 71 nucleotides ABID97_RS06420: ABID97_RS06420 - ATP-binding protein, at 1,357,137 to 1,358,834 _RS06420 ABID97_RS06425: ABID97_RS06425 - PP0621 family protein, at 1,358,852 to 1,359,112 _RS06425 ABID97_RS06430: ABID97_RS06430 - cytochrome c biogenesis protein CcsA, at 1,359,109 to 1,359,918 _RS06430 ABID97_RS06435: ABID97_RS06435 - signal recognition particle protein, at 1,360,035 to 1,361,423 _RS06435 ABID97_RS06440: ABID97_RS06440 - AAA family ATPase, at 1,361,495 to 1,362,634 _RS06440
Group Condition ABID97_RS06420 ABID97_RS06425 ABID97_RS06430 ABID97_RS06435 ABID97_RS06440
carbon source D-Glucuronic Acid (C) -2.2 -0.3 -1.9 N.D. +0.1
carbon source 4-Hydroxybenzoic Acid (C) -1.4 -0.5 -1.2 N.D. -0.1
carbon source D-Gluconic Acid (C) -1.6 -0.2 -1.4 N.D. +0.1
carbon source D-Mannose (C) -1.3 -0.7 -0.8 N.D. -0.2
carbon source Gly-Glu (C) -1.7 -0.4 -0.9 N.D. +0.1
carbon source 4-Hydroxybenzoic Acid (C) -1.5 -0.2 -0.9 N.D. -0.2
carbon source D-Gluconic Acid (C) -1.3 -0.4 -1.2 N.D. +0.2
carbon source L-Histidine (C) -2.0 -0.9 +0.5 N.D. -0.3
carbon source Gly-Glu (C) -1.6 +0.0 -0.9 N.D. +0.0
carbon source D-Mannose (C) -1.3 -0.2 -0.9 N.D. +0.1
carbon source L-Histidine (C) -1.2 -1.0 +0.6 N.D. -0.5
carbon source a-Ketoglutaric (C) -0.6 -0.8 -0.7 N.D. +0.1
carbon source L-Malic (C) -0.3 -0.3 -1.3 N.D. -0.0
carbon source butyrate (C) -0.9 -0.5 -0.4 N.D. -0.2
carbon source butyrate (C) -1.2 -0.3 -0.1 N.D. -0.2
carbon source L-Alanine (C) -1.3 +0.4 -0.8 N.D. -0.1
carbon source L-Alanine (C) -0.9 -0.5 -0.3 N.D. -0.0
carbon source Glycolic Acid (C) -1.2 -0.4 -0.0 N.D. -0.1
carbon source D-Arabinose (C) -0.4 -0.1 -1.0 N.D. -0.1
carbon source L-Malic (C) -0.2 -0.3 -1.1 N.D. +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.5 -1.1 N.D. -0.0
carbon source D,L-Malic Acid (C) -1.6 -0.1 +0.3 N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.1 -1.6 N.D. +0.1
carbon source L-Proline (C) -0.5 -0.3 -0.7 N.D. +0.1
carbon source D-Glucose (C) +0.1 -0.1 -1.3 N.D. +0.0
carbon source D-Glucose (C) +0.3 -0.1 -1.4 N.D. +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.3 -1.5 N.D. -0.1
carbon source Tween 20 (C) -0.3 +1.0 -0.5 N.D. +0.2
carbon source Glucuronamide (C) -0.6 +0.6 +0.5 N.D. +0.2
phage V2_100 +2.7 -0.1 +0.6 N.D. +0.0
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