Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS06390 and ABID97_RS06395 are separated by 80 nucleotidesABID97_RS06395 and ABID97_RS06400 are separated by 196 nucleotidesABID97_RS06400 and ABID97_RS06405 are separated by 177 nucleotidesABID97_RS06405 and ABID97_RS06410 are separated by 350 nucleotides ABID97_RS06390: ABID97_RS06390 - carbohydrate kinase family protein, at 1,348,623 to 1,349,525 _RS06390 ABID97_RS06395: ABID97_RS06395 - histone H1-like DNA-binding protein, at 1,349,606 to 1,350,136 _RS06395 ABID97_RS06400: ABID97_RS06400 - ribonucleotide-diphosphate reductase subunit beta, at 1,350,333 to 1,351,511 _RS06400 ABID97_RS06405: ABID97_RS06405 - ribonucleoside-diphosphate reductase subunit alpha, at 1,351,689 to 1,354,602 _RS06405 ABID97_RS06410: ABID97_RS06410 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 1,354,953 to 1,355,570 _RS06410
Group Condition ABID97_RS06390 ABID97_RS06395 ABID97_RS06400 ABID97_RS06405 ABID97_RS06410
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.2 -0.6 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -0.6 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.7 -0.4 N.D. N.D. N.D.
phage V1_1 -2.5 -0.2 N.D. N.D. N.D.
carbon source Glycolic Acid (C) -2.5 +1.2 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -2.8 +2.0 N.D. N.D. N.D.
carbon source pyruvate (C) -1.6 +1.4 N.D. N.D. N.D.
carbon source Tween 20 (C) -1.3 +1.7 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) -0.8 +1.9 N.D. N.D. N.D.
carbon source L-Histidine (C) -1.3 +2.6 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -2.1 +4.0 N.D. N.D. N.D.
carbon source L-Histidine (C) -0.2 +2.6 N.D. N.D. N.D.
carbon source L-Arabinose (C) +0.5 +2.1 N.D. N.D. N.D.
carbon source D-Fructose (C) +1.2 +1.5 N.D. N.D. N.D.
carbon source Glucuronamide (C) +0.1 +2.6 N.D. N.D. N.D.
carbon source D-Fructose (C) +1.1 +1.6 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) -0.0 +2.9 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) +0.3 +3.0 N.D. N.D. N.D.
carbon source Glucuronamide (C) +0.8 +2.6 N.D. N.D. N.D.
carbon source L-Proline (C) +0.3 +3.5 N.D. N.D. N.D.
phage V2_100 +0.6 +3.3 N.D. N.D. N.D.
carbon source L-Proline (C) +0.6 +3.3 N.D. N.D. N.D.
carbon source L-Alanine (C) +1.3 +3.0 N.D. N.D. N.D.
carbon source L-Alanine (C) +1.2 +3.2 N.D. N.D. N.D.
carbon source L-Tryptophan (C) +1.0 +3.4 N.D. N.D. N.D.
carbon source L-Tryptophan (C) +1.1 +3.4 N.D. N.D. N.D.
carbon source butyrate (C) +0.0 +4.9 N.D. N.D. N.D.
carbon source butyrate (C) -0.2 +5.4 N.D. N.D. N.D.
carbon source D-Arabinose (C) -0.2 +7.3 N.D. N.D. N.D.
carbon source D-Arabinose (C) -0.0 +7.4 N.D. N.D. N.D.
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ABID97_RS06390
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