Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS06070 and ABID97_RS06075 are separated by 12 nucleotidesABID97_RS06075 and ABID97_RS06080 are separated by 72 nucleotidesABID97_RS06080 and ABID97_RS06090 are separated by 489 nucleotidesABID97_RS06090 and ABID97_RS06095 overlap by 4 nucleotides ABID97_RS06070: ABID97_RS06070 - flavin reductase family protein, at 1,283,080 to 1,283,703 _RS06070 ABID97_RS06075: ABID97_RS06075 - NAD(P)/FAD-dependent oxidoreductase, at 1,283,716 to 1,285,356 _RS06075 ABID97_RS06080: ABID97_RS06080 - cysteine synthase A, at 1,285,429 to 1,286,349 _RS06080 ABID97_RS06090: ABID97_RS06090 - RNA pseudouridine synthase, at 1,286,839 to 1,287,549 _RS06090 ABID97_RS06095: ABID97_RS06095 - MBL fold metallo-hydrolase, at 1,287,546 to 1,289,222 _RS06095
Group Condition ABID97_RS06070 ABID97_RS06075 ABID97_RS06080 ABID97_RS06090 ABID97_RS06095
carbon source Gly-Glu (C) -0.5 -0.1 -0.4 -0.5 -1.5
carbon source L-Phenylalanine (C) -0.7 -0.3 -0.5 -0.3 -0.9
carbon source D-Glucose (C) -0.4 -0.1 -0.1 -0.5 -1.3
carbon source succinate (C) -0.4 -0.2 -0.1 -0.4 -1.2
carbon source acetate (C) -0.3 -0.1 -0.4 -0.3 -1.1
carbon source D-Arabinose (C) -0.3 -0.2 -0.1 -0.1 -1.3
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.1 -0.2 -0.3 -0.8
carbon source L-Lactate (C) -0.4 -0.3 +0.0 -0.3 -0.9
carbon source Fumarate (C) -0.5 -0.0 -0.2 -0.0 -1.1
carbon source propionate (C) -0.1 +0.0 -0.6 -0.0 -1.0
carbon source Gly-Glu (C) -0.4 +0.1 +0.2 -0.3 -1.4
carbon source D-Xylose (C) -0.2 +0.1 +0.1 -0.1 -1.3
carbon source D-Ribose (C) +0.0 +0.2 -0.3 +0.1 -1.3
carbon source L-Leucine (C) -0.2 +0.1 +0.2 +0.1 -1.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.3 +0.0 +0.1 -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.2 -0.3 +0.1 -1.2
carbon source L-Histidine (C) -0.4 +0.2 +0.4 +0.2 -1.2
carbon source butyrate (C) -0.2 +0.4 +0.3 +0.0 -1.1
carbon source D-Xylose (C) -0.2 +0.2 +0.5 +0.1 -1.1
carbon source D-Glucuronic Acid (C) -0.0 +0.3 +0.5 +0.2 -1.4
carbon source Formate (C) -0.4 +0.2 +0.1 +0.4 -0.7
carbon source Glucuronamide (C) -0.2 +0.3 +0.5 +0.0 -0.9
carbon source D-Gluconic Acid (C) -0.2 +0.2 +0.6 +0.3 -0.8
carbon source Ethanol (C) +0.2 +0.5 +0.2 +0.1 -1.0
carbon source L-Threonine (C) -0.1 +0.3 +0.4 +0.4 -0.8
carbon source L-tyrosine (C) +0.2 +0.2 +0.3 +0.3 -0.8
carbon source D-Serine (C) -0.0 +0.4 +0.6 +0.4 -0.8
carbon source D-Serine (C) -0.0 +0.4 +0.7 +0.4 -0.7
carbon source D,L-Malic Acid (C) +0.6 +0.3 +0.7 +0.1 -0.7
carbon source D,L-Malic Acid (C) +0.2 +0.3 +0.6 +0.3 -0.3
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