Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS05705 and ABID97_RS05710 are separated by 390 nucleotidesABID97_RS05710 and ABID97_RS05715 are separated by 55 nucleotidesABID97_RS05715 and ABID97_RS05720 are separated by 3 nucleotidesABID97_RS05720 and ABID97_RS05725 overlap by 4 nucleotides ABID97_RS05705: ABID97_RS05705 - GDP-mannose 4,6-dehydratase, at 1,201,569 to 1,202,606 _RS05705 ABID97_RS05710: ABID97_RS05710 - glycosyltransferase, at 1,202,997 to 1,207,046 _RS05710 ABID97_RS05715: ABID97_RS05715 - ABC transporter ATP-binding protein, at 1,207,102 to 1,207,857 _RS05715 ABID97_RS05720: ABID97_RS05720 - ABC transporter permease, at 1,207,861 to 1,208,667 _RS05720 ABID97_RS05725: ABID97_RS05725 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 1,208,664 to 1,210,082 _RS05725
Group Condition ABID97_RS05705 ABID97_RS05710 ABID97_RS05715 ABID97_RS05720 ABID97_RS05725
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 -3.8 N.D. N.D. -3.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.3 -3.2 N.D. N.D. -3.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -2.5 N.D. N.D. -2.1
plant outgrowth control Plant outgrowth control -2.1 -2.5 N.D. N.D. -1.8
plant outgrowth control Plant outgrowth control -2.1 -2.3 N.D. N.D. -1.5
carbon source D-Gluconic Acid (C) -2.4 -2.1 N.D. N.D. +0.2
carbon source D-Mannose (C) +1.2 +1.1 N.D. N.D. -2.8
carbon source 2-Deoxy-D-Ribose (C) +1.1 +1.3 N.D. N.D. +2.4
carbon source L-Glutamic (C) +1.2 +1.3 N.D. N.D. +2.4
phage V2_100 +0.8 +1.0 N.D. N.D. +3.1
carbon source L-Arabinose (C) +1.3 +1.5 N.D. N.D. +2.3
carbon source L-Arabinose (C) +1.3 +1.5 N.D. N.D. +2.2
r2a outgrowth control R2A outgrowth control +1.5 +1.6 N.D. N.D. +2.0
carbon source L-Proline (C) +1.5 +1.7 N.D. N.D. +2.0
carbon source D-Serine (C) +1.4 +1.6 N.D. N.D. +2.4
carbon source Glucuronamide (C) +1.6 +1.6 N.D. N.D. +2.2
carbon source L-Proline (C) +1.6 +1.9 N.D. N.D. +1.9
r2a outgrowth control R2A outgrowth control +1.5 +1.6 N.D. N.D. +2.3
carbon source D-Ribose (C) +1.6 +1.7 N.D. N.D. +2.2
carbon source propionate (C) +1.7 +1.8 N.D. N.D. +2.1
carbon source Ethanol (C) +1.6 +1.8 N.D. N.D. +2.3
carbon source D-Fructose (C) +1.5 +1.9 N.D. N.D. +2.6
carbon source propionate (C) +2.1 +2.1 N.D. N.D. +2.0
carbon source D-Ribose (C) +1.8 +1.9 N.D. N.D. +2.5
carbon source Formate (C) +1.6 +1.9 N.D. N.D. +2.7
carbon source D-Fructose (C) +1.6 +1.9 N.D. N.D. +2.9
carbon source D-Serine (C) +1.9 +1.9 N.D. N.D. +2.6
carbon source L-Threonine (C) +1.7 +2.1 N.D. N.D. +2.9
carbon source Glucuronamide (C) +2.1 +2.2 N.D. N.D. +2.9
carbon source L-Threonine (C) +1.9 +2.3 N.D. N.D. +3.3
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